KEGG   Liolophura japonica (common chiton): 135480986
Entry
135480986         CDS       T09976                                 
Name
(RefSeq) LOW QUALITY PROTEIN: roquin-1-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
ljp  Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:ljp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ljp03000]
    135480986
   04121 Ubiquitin system [BR:ljp04121]
    135480986
Transcription factors [BR:ljp03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    135480986
Ubiquitin system [BR:ljp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    135480986
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-RING_5 zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4_3 zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf_CCCH_4 Prok-RING_4 Zn_finger_prot zf-CCCH_DUS3L zf-RING_10 RING_XB3-XBAT31 zf-CCCH_UNK zf-C3HC4_5
Other DBs
NCBI-GeneID: 135480986
NCBI-ProteinID: XP_064616987
LinkDB
Position
13:complement(22840766..22875326)
AA seq 1167 aa
MPIQPPQWTEFLSCPVCYKKFNDSVELPISLGCGHTVCKVCLSKLHQKKCPFDQTLISRS
IEELPVNLALLQLAGATIPEQDIISISSISENFKYYDSARRCVGDLAAHLKCLATGIGQL
NSLLSRPMQRKLVTLINCQLVEEEGRSRAMRSARSLGERSVTELILQHQNPTQLSTNLWA
AIRARGCQFLGPAMQEEVLKLILLALEDGSPLSRKVLVLFVVQRLESQYPQASKTAIGHV
VQLLYRASCFKVTKREEESSLMQLKEDFXTYELLRREHDSQVVQIATEAGLRIAPEQWSS
LLYGDAAHKSHMQSIIDKLQTPQSFAQSVNELVIALQRTGDLGNLARLCPHLELLANVDP
SPDAPPPTWENLEAVLKAVRTSCAGLVDFLHFHSQKKPELPALHSTKYKTSLCRDFAQKS
SCPRGANCTFAHSQEELERARGRNKKSGVKPGLLIPPALPSQMSVQDGGELREATRSPNI
MRSVRGFGATRSESQDLTVDGEIDSGPAEPMLTHSVASTASPLPPMIAPPSVMSSRVGLP
MYTGGMPYRNPTGPPRDEYVPANLQTQTVPSVSRYNHHPYMAEGVYYPQHGVSTFPASFT
TDVPGQYPGGVGYHTPPSSHNLHNATHYMGCLRVSLPQWRKLGYNVLRTTPVKGIGNTKT
LLFKSALAATPDNLRGSSVAEASDTPARHNDPGASVAEGPGRESLDDLHHRRKKILVHLN
RAPTPLPPTPSEPPCGVGPPPTPSTAPQGINPPGLYRLKSVPMSDSGITLPSLERRPPSS
HELAKSVTDTYNASRSLSTLSLSSQGSCPREGMVYTPWSTGESYTPTSDILVDTSTRGSA
AYTEKYPEMETEEEFNLYKELSDQMRDVNVESPSPVMSTALSSSPSATSTERSIHGCAKS
SASSLDDAYFIPFDPPIVSKYGPISRTSKAKLKSSDPVLVTAKSDSYMVTAVTAVTPTTR
PYPVSVQTPSRFAVESVPSQLCPNAEPFTSRVAMPQMPRPQGETNNKSQPYTLWESRDMM
YPPPSVGNPTVQDRLKHELAMVEHQIHIRENSTRKLSDKERLQCELQAIEKHISLQTGKP
PNASLETSTNHTRRPASSSTRVWPANKKIFTKSGPVLDPDIDLNAALTPEEEQELNDLHL
LVQTSKKDNGCAENQTGTFTSKETQEH
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgcctatccagccaccacagtggacagagttcctctcctgtcccgtttgctacaagaag
tttaatgactccgtggagctaccaataagccttggctgcgggcacaccgtctgcaaagtc
tgtctctcaaagctacatcagaagaaatgtccatttgaccagaccctaatttctcgctcc
attgaagagctcccggtgaatttggcactcctccaattagcgggcgccacaattcctgaa
caggacatcatcagtatcagcagcatatcagaaaacttcaagtattatgactctgcgaga
agatgtgtaggggatctggctgcacatctcaagtgtttggctacaggaataggccagcta
aacagcttactgagtcgcccaatgcagcgtaagctcgtgaccttgatcaattgtcagctt
gtagaggaggaaggtcgctcgcgcgccatgagatctgcacggtcgttgggagagcgctct
gttactgagcttatccttcagcaccagaaccctactcagctctccaccaacctctgggcg
gccattagagcaagaggatgtcagttcctagggccagctatgcaggaggaagtcctcaaa
ttgatcctcctagccttggaggatggctctcctttatccaggaaagtcctcgttctcttt
gtggttcagcggttggagagccagtacccacaagcctcgaaaactgccattggtcatgtg
gttcagctcctctacagggcatcctgcttcaaggtaaccaagcgagaggaagaatcttca
ttaatgcagctgaaagaagacttcnggacatacgagttgctccgacgtgagcacgactca
caggtggtgcagattgctacggaggcggggttacgcatcgcgccagagcaatggtcgtct
ctgttgtatggagacgccgcccataaatctcatatgcagtccatcattgacaagttgcag
acacctcagtcatttgcacaaagtgttaatgagctggtcatcgccctacagaggaccggt
gacctgggtaacttagcacgtctctgtccccacctcgagctcctggccaacgtagaccct
tccccagatgcaccacctcccacctgggaaaacctggaggcagtgctcaaggcagtgcgg
acaagttgtgcagggcttgtggacttcctccacttccacagtcagaagaagccagaacta
ccagcactccacagcactaagtacaagaccagtctgtgccgggacttcgcccagaagagc
tcctgccccaggggagctaactgtacttttgcccactcacaggaggagctggaaagagca
agaggtcgtaacaaaaagagtggtgttaagccagggctgttaatccctccggccctgcca
agccagatgtcagtccaagatgggggagagctcagagaggccaccaggagtcctaacatc
atgaggtccgtcaggggctttggggcgacaagaagcgagagtcaggatctcaccgtagac
ggggagattgacagcggccctgccgaacccatgctgacccacagtgtagcatcaacggcc
tctcccctgccccccatgatcgccccgccctccgtgatgagctcgcgggtggggctgccc
atgtacacaggggggatgccgtatcgtaaccccacagggcccccgagggatgagtacgtc
ccggctaacctacaaacgcagactgtacccagtgtgtcacgctacaaccaccatccatac
atggcagaaggggtctactacccacagcatggtgtttcaacgtttcctgccagctttacc
actgacgtacctggtcagtaccccggaggggtcggctaccatacacccccatccagtcac
aaccttcacaatgctactcattacatggggtgtctacgagtctcgctaccccagtggaga
aaactggggtataatgtattgaggacaactcctgttaagggcataggaaacaccaagacc
ctgttgttcaaaagtgcattagctgctacacctgataatttgagggggtcctccgtggcc
gaggcgagtgacacgccggcacggcacaatgacccaggagcctctgtggccgaggggcct
ggccgtgagagtttagacgatctccatcatcgcaggaaaaagatcctggtccaccttaat
cgtgctcctactcctctcccccctaccccctcagagcctccctgtggggtggggccaccg
ccaacaccctcaactgccccccagggcatcaatccccctggattatacagactcaaatct
gtgccgatgtcagattcagggattacgctaccctcccttgagagacgtccaccgtcatcc
catgaactggcaaagtctgtcaccgacacgtacaacgcatccaggtccctgtcaacactt
agtctgagttctcaaggaagttgtcctagggagggcatggtctatactccatggtcgaca
ggagagtcctacacgcccacctctgacattctggttgacacttccaccagagggtccgct
gcgtacactgagaagtaccctgaaatggaaacagaagaagagtttaacctgtacaaggaa
ctgtccgatcagatgagagatgtcaatgtggagagtcccagccctgtgatgtccacagcc
ttgtccagtagtccctcagccacatccacagagaggagtattcatgggtgtgccaagtcc
tcagcgtcttctttggacgacgcttacttcatcccgtttgacccaccaatcgtgtccaaa
tatggtcctatatcgagaacatccaaagccaaactgaagagttctgaccctgttttagtt
acagcaaaaagtgattcgtacatggttactgcggtgacagctgtcacccccaccacacgc
ccatacccggtctccgtgcagacaccatccaggtttgctgtagagagtgtgcccagtcag
ctgtgtcctaacgcagagccgttcaccagcagggtggccatgccccaaatgccacgaccc
cagggggaaaccaacaataagtctcagccttacaccctctgggaaagtcgagacatgatg
taccctcctccctcagtgggcaaccccacggtacaggacaggctgaagcatgaattggcc
atggtggagcaccagatacacatcagagaaaactcaaccaggaaactgagcgacaaggag
aggctacagtgtgagctacaggccatagagaaacacatatcactgcaaacgggtaaacct
cccaatgcttctctggaaacatccacaaaccacacaagaaggcctgcctctagtagtaca
agggtttggccagcaaacaagaaaatattcactaaatctgggcccgtccttgacccggat
attgacctcaatgcagccttgacccctgaagaggagcaggagctcaacgacttacatctg
cttgtgcaaaccagtaagaaggacaatggctgtgcagaaaaccagactggtacatttacc
agcaaagagacgcaagagcactga

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