KEGG   Liolophura japonica (common chiton): 135481274
Entry
135481274         CDS       T09976                                 
Name
(RefSeq) DNA repair protein XRCC1-like isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
ljp  Liolophura japonica (common chiton)
Pathway
ljp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ljp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    135481274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ljp03400]
    135481274
DNA repair and recombination proteins [BR:ljp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     135481274
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 135481274
NCBI-ProteinID: XP_064617196
LinkDB
Position
1:complement(90857341..90882484)
AA seq 593 aa
MPDIKFQHIVSFSSEDKNHPAENLLKAGGSYKWKGATPGEKQLSAVIQLEKAYQIYSLDI
GNEGSAFVEVLVGRSSSPDQDFEVLLVSSSFMSPMESRNGTNRNSVRIFGSDKLSKTTAS
QKWDRVKVVCTQPFNKTSTYGLSFITLHAPPDPGERDNTTSKEEGTKTLGAFRLKAEPED
KGSLKVGTLFARRDHEKPAPPSITGAAAIRAASKLAEESLNSSFTPSKPALSSHTQSAQK
RKHPDSDGDVTSIASPPPKVPLRKHSTSSGSSSAGKHRCETPPALKKTKSEPVKESPARE
FGKVMEGVVFVLSGYTNPRRGEIRDKALKMGAQYRSDWGKGCTHLVCAFAKTPKYNAVAG
KGKIVTHHWVNDCYKTKKLLNWKDYRCGDAETPSESSEDEEGIIHKKKVKTPSKSVSSDK
TDVYGEDTEPEDSGEDTEDELRKLKEKQASNKKSPKAADQVSADPYGDSTDEDEFNATSK
SGSKPSAATGDDSDSGLPELPDFFTDKKFFLYGDFVASERRLLVRYITAFNGDVCDYMSD
DTNYVVTNAQWDKNFDEALSDAPSLIFVKPKWVFSCNEKNKLVPYQPYIVVPQ
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgccagatatcaaattccagcatatagtgtcattcagtagtgaagataagaatcatcca
gcagaaaatctgttgaaggcaggtgggagctacaaatggaaaggtgctacccctggagaa
aaacagttatcagctgtaattcagctggagaaagcctatcagatttactctctggacatt
ggaaatgaaggttcagcctttgtggaggttctggtgggacggtcctcctcgccagatcag
gactttgaggtattgctggtgtcatcatccttcatgtcacccatggagagtcgtaatggt
accaacagaaacagtgtgagaatatttgggtcggacaagctgtccaaaactacagccagt
caaaagtgggacagggtgaaggttgtctgcactcaaccttttaataagacatccacatat
ggcttatccttcatcacactacacgcaccaccagatccaggggaaagagataacaccact
tctaaagaagagggcacaaaaactctgggcgcattccgcctgaaggcagagccagaagac
aaaggatcgctaaaagtgggcacgctatttgcccgccgggatcatgagaaacctgcccca
ccctctatcacaggtgctgctgcaattcgagctgcgtctaaactggctgaggagtctctg
aactccagtttcactccgtccaaaccagccttgagttcacacacccagtctgctcagaag
agaaaacaccctgacagtgacggtgatgtgacctctatagccagcccgcctcccaaagta
cctctgagaaaacactccaccagttctggctccagctcagcaggaaagcataggtgcgaa
accccacctgcactgaagaaaaccaagtctgagcccgtgaaggaatctccagccagagag
tttggaaaggtgatggaaggtgtggtgtttgtactgagtggttataccaaccccaggaga
ggagaaattcgagacaaggccctgaagatgggggcgcagtaccgatcagactggggaaag
ggctgtactcatctggtgtgtgcatttgccaagactccaaagtacaatgcggtagctggg
aaagggaaaattgtcactcaccactgggttaatgactgctacaagacaaaaaaacttctc
aactggaaagactacagatgtggtgatgcagagacacccagcgagagctctgaagacgaa
gaggggataatccacaagaaaaaagtcaaaaccccatcaaagagtgtgtcatctgataag
acagatgtgtacggtgaagacaccgagccagaggactctggggaggatacagaggatgag
ctgaggaagctaaaggagaagcaggcctccaacaagaagagtcctaaggctgcagaccag
gtctcagccgatccttatggagattctacggacgaggacgaatttaacgcaaccagtaag
agtggtagcaaaccttcagcggccacaggggatgactctgactctggactgcctgagctg
ccagacttctttaccgacaagaagttcttcctgtacggtgactttgtggcatcagagaga
aggctgctggtgagatacatcacagcctttaacggtgatgtttgtgattatatgtctgat
gacacaaactatgtagtgacaaacgctcagtgggacaagaactttgatgaggccttgtcg
gatgccccatcattgatctttgtcaaaccaaagtgggtgttctcctgtaatgagaagaac
aagctggtaccgtatcaaccttatattgtggtcccccagtag

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