Liolophura japonica (common chiton): 135481913
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Entry
135481913 CDS
T09976
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135481913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljp03021
]
135481913
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135481913
Transcription machinery [BR:
ljp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135481913
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135481913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_2
zf-CCHC_3
zf-CCHC_4
zf-CCCH_4
zf-C2H2_10
Lin-28A-like_zf-CCHC_2
zf-CCHC_2
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
135481913
NCBI-ProteinID:
XP_064617762
LinkDB
All DBs
Position
1:complement(36724761..36731394)
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AA seq
271 aa
AA seq
DB search
MQEVVANVTNIKFDIEFALEQQLGAQPLPFPGMDKSGAAICTFYLRSLCSKGGACPFRHV
KGDRTIVCKHWLRGLCKKGDDCEFLHEYDMTKMPECYFFSKFGLCSNKECPFLHIDPEKK
IRDCPWYDRGFCRHGPNCKNRHVRRVICLCYLNGFCLEGPNCKFMHPKFDLPTSDPVAQA
KKASIVCHFCGETGHKAANCPSMGHNAVRPQTVPVVHTQNESAPRPQVHTEPRRPLDQVT
CYKCGEKGHYANKCPKGHLAFLSSSLAPQQT
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggttgttgcaaatgttaccaacatcaaatttgacattgaattcgcccttgag
caacaactcggggcacagccgcttccttttccagggatggataaatctggtgctgcaatt
tgtaccttttatctaaggagtttatgcagcaaaggtggcgcctgcccattcagacatgtg
aagggggacaggacaattgtgtgcaagcattggctcagaggactgtgtaaaaagggagac
gactgtgaattcctccatgaatatgacatgacaaagatgcctgaatgttacttcttctca
aaatttggtctgtgtagtaataaggaatgtcccttccttcacattgatccggagaagaaa
attagagactgtccatggtatgatcgtggcttttgtcggcatggacctaattgtaagaac
cggcatgtcaggagagtgatctgtctgtgttacctgaatggtttctgtttagaaggaccg
aattgtaaatttatgcatccaaagtttgatcttcccacaagtgatcctgtagcgcaggct
aagaaggcttctattgtatgtcacttttgtggggagacaggtcacaaggcagctaactgt
cccagcatgggtcataatgcagtcagacctcagactgttccagtagtacacacacagaat
gaatccgcacctcgtccccaggtgcacacagaacctagaagacctctggaccaggttact
tgttataagtgtggtgaaaaaggtcattatgctaataagtgtccaaagggtcatctagca
ttccttagctcatccttggcccctcagcaaacctaa
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