Liolophura japonica (common chiton): 135482043
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Entry
135482043 CDS
T09976
Name
(RefSeq) THO complex subunit 4-B-like
KO
K12881
THO complex subunit 4
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03013
Nucleocytoplasmic transport
ljp03015
mRNA surveillance pathway
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135482043
09122 Translation
03013 Nucleocytoplasmic transport
135482043
03015 mRNA surveillance pathway
135482043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135482043
03041 Spliceosome [BR:
ljp03041
]
135482043
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135482043
TREX complex
135482043
Spliceosome [BR:
ljp03041
]
Complex C
Other components
EJC/TREX
135482043
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135482043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
135482043
NCBI-ProteinID:
XP_064617939
LinkDB
All DBs
Position
1:complement(4937316..4948670)
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AA seq
274 aa
AA seq
DB search
MSAGDKIDLSLDDIIKMNKKGGGGGGRGRGGRRGGTSGLRGRAGTSRGRGGRRGAAGGGV
FRGGVQKRRGGRPTPYSRPKEMPDVWQHDMFDGGSSPLKKLGGSIGGGVGGGLQAGKLLV
SNLDFGVNDSDIQELFAEFGPLKKAAVHYDRSGRSLGTAEVIFERRSDAVKAMKQYNNVP
LDGRPMNIQLVGSPASDTTSRLQQGGRLGYSAGSYGGGSGGGARSGNTRSRGAGRGRGRG
RGGNRGGRRNQQKPMTAEELDAELDAYNSKMDVQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgggcgacaagatagacctaagtctagatgacatcataaaaatgaacaagaag
ggtgggggaggcggtggaagaggccgcggagggcgtcgtggtggtacgagtgggttgaga
ggacgcgcgggcacatcccgaggccggggcggccgtcgtggggcagctggcggtggggtt
ttccgaggcggagtgcagaaaagaagaggtggtagaccaacaccttattcacggcccaaa
gagatgcctgatgtgtggcagcacgacatgtttgatggtgggtccagccccttgaagaag
cttggagggtctataggagggggagtaggaggaggcctgcaggcaggcaaactgctcgtc
tcaaacctggactttggagtcaacgactccgacatacaggaactttttgcggagtttggg
cccttgaagaaagctgctgtccattatgatcgatctgggagatctttaggcacagcagaa
gttatatttgagcggagatcagatgctgtcaaagcaatgaagcagtacaataatgtgccc
cttgatggtcggcccatgaacatacaattagtgggttctccggccagcgacaccacatcg
aggttacagcaagggggacgactgggctattctgcagggagctatggcggcggcagtggt
ggaggtgcccgatcaggcaacacaagaagccgtggagctgggcgaggtcgagggagggga
agagggggtaaccgaggtggtcgtcgaaatcaacagaagccaatgacagcggaagagcta
gatgcggaactggacgcatacaattccaagatggatgtacaatag
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