Liolophura japonica (common chiton): 135482187
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Entry
135482187 CDS
T09976
Name
(RefSeq) SR-related and CTD-associated factor 4-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljp03021
]
135482187
03041 Spliceosome [BR:
ljp03041
]
135482187
Transcription machinery [BR:
ljp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135482187
Spliceosome [BR:
ljp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
135482187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_PARP14_3
NBAS_11th
Motif
Other DBs
NCBI-GeneID:
135482187
NCBI-ProteinID:
XP_064618126
LinkDB
All DBs
Position
1:68184098..68199474
Genome browser
AA seq
1406 aa
AA seq
DB search
MEAVRAFNNELSSLYEVKPPVSRAKMTHVTKCAIKAIKFYKHVVQSVEKFILKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVYAPRFTKNIVVTFQNLFKCPTDERSKIVRVLNLWQKN
GVFPIEVIQPLMDLAGDPNNADLAAAAQRAVERVVPTPKSSQQKAHTPAKPVESAKVKAN
PVMNSQASADSILTTQTDMLNTVNQLLQQTQQPQSLDEQQQQLHQLQILQQQLLEQTQTM
QHPEDQGAVIDNTLLAQIQTLTNQLLSKTGDLNKPPEPSFDKKLLDFDYGESDEDDDRKE
EAGARNSSGPVQHLLTDPALMEHIQQMSQTIQKTEQLKNELNIQEQMRQQMLQQQQEEFD
QQINQGPGIGRPPMHPGPSHPVMAPYPGMIEPPLPPDSSQDMETDDVIIIHDDTDFQRDR
SHRGRDRSRSPKRRRRSRSRSRDRRKRSRSRDRRRRSRSGDREKAREKERERWKKRLPPI
KEKHVSVCSTTIWVGHLAKLTSEEELVRELENYGAVDSINMIPPRGCAFVCMNRRKDAAK
AVEKMKGLKINGSAIKIAWAPGKSMKDLGFKDMWNVDLGVTYVPWDKLPTDPSLLVDGGM
IDEDTIPDHLKELAAAMHQTEAPTEEKPDAASVNNVPVPIGLPPGGPPSLPPGQPPFPQM
PGLPPANSIRVLQPGQPVGLLNPMLIPMPGQTLANMPGAQVGMHPIMSLTQPRLPQVNAA
GPIPLMSIPNQTSTTSAGSQLNAAIQNIMSSSGGPTAVTQAVPGMVRPGFSGPRPGMFQP
GFNPPGFNPNVPPPHVPPPNFRLPPPAFGGSSAPLGDGDSTPEQDEGQATVTKVISNDWP
SKFPNREGDDRDQFPKTPGFGQPPSDIRMPLPHEQNLLPSSQAGNRLPPPRGPAPPVFSQ
HNSPMNANSPRPLLGPRMMQPERPDMNGPSVRPFMVGPQGIAGMNRPFGPGAMGNQMRPQ
GPGDMGGPQPLMGNRFGGPRNPGQSLLGIRPGFPGSRMLGPPQQRFGSNPPGGPGGPRPQ
SFGHPMDDRIRPLFGDSPNRPFERPDFDRFGDRPRFHHPRGNGPDDRPLVPDRWGPLDGP
PGLDRERDPGDRGGPFRDRFERNEFRRDDDGNPDWRVNRRESRNHRMPFEDNEMASPGRR
RDSRGRHGDRDEQDKGGDRDRDRDRERDRDRGRDRDRDRSRRSRWSNLDPSQTGEAKENF
SEPAEHMDDSVNMETVDMNISANSGEHDEEKTKGSVLQSAGVESDLMAQSQTSESIDKSQ
VDVVKEPEVGAGTVEALPEVLKELPEAQSNTDPSTGQLNEAAMPVSEILATIPSEPSVVP
SESIDSVPAAVSQHTAPPVETEQQREVDQSQVTPANGSSTHAKEEPVVQKQPNDIVLNES
TAEKPCPAKTQSPMEEGELEPGEVSS
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtaagagccttcaacaatgagctctcctcgttgtatgaggtgaagccacca
gtgtccagggctaagatgacacatgtcacaaaatgtgccatcaaagccatcaagttttat
aaacatgttgtacaaagtgtggaaaagtttattcttaagtgcaaacctgaatataaggta
cctggactgtatgtcatagattctatagttcgacagtctcgccatcagtttgggcaggag
aaagatgtgtatgcaccacgattcaccaaaaacattgtggtgactttccagaacttgttt
aagtgtcctacagatgaaaggagtaagattgtcagggtgttgaacctttggcagaagaat
ggagtgttccccatagaagttatacaaccgttgatggatttggctggagatcctaacaat
gcagatctagcagctgcagctcaaagagctgtggaaagagtggttcctacccccaagtct
agtcaacagaaggcccatacccctgccaagcctgtggagagtgctaaggtgaaggctaac
ccggtaatgaatagccaggcctcagcagatagcatcctcaccacacagactgacatgctg
aacacagttaatcagcttctacagcagacacaacagccgcagagtttagatgagcagcag
cagcagctgcatcagttgcagatcttgcagcaacagttgttagagcagacccagacgatg
cagcacccagaggaccaaggagctgtgatagacaatacactactggcccagatccaaacc
ctcacaaatcaacttctcagcaagactggggatttgaacaagccaccagaaccttccttt
gacaagaagctgttagactttgattatggagagagtgatgaggatgatgacaggaaggaa
gaagctggggctcgtaattcctcgggacctgtccagcatctactcactgatccagcttta
atggagcatatacagcagatgtcacagactattcagaaaacagaacagttaaagaatgag
ctcaatatacaggagcagatgagacagcagatgttacaacagcagcaggaggaatttgac
cagcaaattaatcagggccctggtattggcaggccccccatgcatccaggcccctcccac
cctgtgatggccccgtacccaggaatgatagaaccacccctcccccctgattcctctcag
gacatggaaacggatgatgtaatcatcatacacgatgacacagacttccaaagagaccgt
tctcacagaggcagggaccgctcaaggtctccaaaaagacgacgtcgctcacgatctaga
tcgagggacagaaggaaaaggtcgcgatcaagggataggcgcaggaggtctcgatctggt
gacagagagaaagcaagagaaaaggaaagagagaggtggaagaaacgcttacctccaata
aaggaaaaacatgttagtgtttgttcaacaactatatgggtgggtcacttggctaaactt
acctcagaggaagaactagtgcgagagttggaaaattatggtgccgtggattcaataaat
atgattcccccacgaggctgtgcttttgtctgtatgaacagaaggaaagatgctgcaaaa
gctgtggagaaaatgaaaggattaaaaattaatggcagtgctatcaagatagcatgggcg
ccaggaaaaagtatgaaagacctaggttttaaagacatgtggaatgtggatttgggggtg
acgtatgtaccttgggacaaactgccaacagacccgtctctccttgtggatgggggaatg
atagatgaagataccataccagatcatttgaaagaattagcagcagccatgcatcagaca
gaagcaccaacagaagagaagccagatgcagccagtgttaacaatgtccctgtgcccatt
ggtcttccccccggaggaccaccttcccttccacctgggcaacctccgtttccacaaatg
ccaggcctgcccccagccaactctatccgtgtattgcagccaggtcagcctgtaggactt
ttgaaccccatgctgatcccgatgccaggacagaccttggctaacatgcctggagctcaa
gtgggcatgcatcctatcatgtccctcactcaacccaggctgcctcaggtgaatgctgct
gggccaattccgttaatgtccattcctaaccagacgtcaaccacgtcggcaggttcccag
ctcaatgctgctatacagaatattatgtcaagtagtgggggaccaactgctgtcacacag
gcagtccctgggatggtcaggccagggttcagcggtcccaggccagggatgttccagcct
ggcttcaatcccccaggatttaaccccaacgtgccaccaccgcacgttcctcctccaaac
tttcgactacctccccctgcttttggcggcagcagtgcaccactgggtgacggagattca
accccagaacaggatgagggtcaggcaactgtcaccaaagtcatctcgaatgactggcca
agcaaattcccaaatcgtgagggagacgatagggatcagttccccaagacccctggcttt
gggcagcccccttctgacattcgtatgccactgcctcatgagcagaatcttctccctagc
tctcaagctgggaatagactgccgccaccacggggacctgccccacctgtgtttagtcag
cacaacagccctatgaatgccaactcacctagacctctgttaggtccacgaatgatgcag
ccagaaagaccagacatgaatggcccgtctgttagaccattcatggtgggaccccagggt
atagccgggatgaacaggccatttggaccgggtgcaatgggcaaccagatgagacctcag
gggcctggtgatatgggtggacctcagcctttgatgggcaatcggttcggcggaccacgt
aatcctggtcaatcattgctgggtattagaccagggttccctggcagccggatgctggga
ccacctcaacagcgatttggctcaaacccacctggtggtccagggggtccaagaccccaa
agctttggccaccctatggatgatcgaatacgaccgctgtttggcgatagccccaataga
ccgtttgaaagacctgactttgatagattcggtgatcgtccacgatttcatcatccacgt
gggaatggtcctgatgataggcctcttgtaccggaccgatgggggcctctggacggacct
ccaggacttgaccgagaaagggacccaggagacagagggggcccattcagagataggttt
gaaagaaatgagttccgaagagacgatgatggaaacccagactggagagtgaatagacga
gaaagtcgcaaccacaggatgccttttgaagataacgaaatggcatctcctggtcggcgg
agggactctaggggtcgacatggtgatcgggatgaacaggataaagggggtgacagggac
agggatagggacagagagagagacagggaccgaggaagagacagggatagggacagaagt
agacgcagtaggtggagtaatcttgacccttctcagacaggggaagccaaagagaacttc
agtgaacctgccgagcacatggacgatagtgttaacatggaaactgttgacatgaatata
tccgccaactccggcgaacatgatgaagaaaagacaaaaggctcagtgctccagtcagct
ggtgtagaatctgatctcatggcccagtctcagaccagtgaatctatagacaagtcacaa
gttgatgtggtgaaagaaccagaagtgggtgctggtactgtggaggcattgcctgaagta
ctaaaagaactaccagaggcccagtcaaatactgatccgtctacaggacagttaaacgaa
gccgcaatgccggtgagtgaaattttagcgacaatacccagtgaaccttcggttgttccg
tcggagtctatagacagtgttccggctgcagtgtcccagcacacggctccgcctgtagaa
actgaacagcagcgtgaagtagaccagtcccaggttactccagcaaacggttcctcgacg
catgcaaaagaggagccggttgtacaaaagcaacccaatgacattgttttaaacgagagc
acggccgagaagccatgccctgcaaagactcagtccccgatggaagagggcgagttggag
ccgggagaggtgtccagctga
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