Legionella jordanis: NCTC11533_00687
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Entry
NCTC11533_00687 CDS
T06275
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ljr
Legionella jordanis
Pathway
ljr03420
Nucleotide excision repair
ljr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ljr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC11533_00687 (uvrD)
03430 Mismatch repair
NCTC11533_00687 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljr03400
]
NCTC11533_00687 (uvrD)
Enzymes [BR:
ljr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11533_00687 (uvrD)
DNA repair and recombination proteins [BR:
ljr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11533_00687 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC11533_00687 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
Snf7
PAH
Motif
Other DBs
NCBI-ProteinID:
VEH11842
LinkDB
All DBs
Position
1:692222..694396
Genome browser
AA seq
724 aa
AA seq
DB search
MTALLEGLNERQREAVAAPLGNTLVLAGAGSGKTRVLVSRIAWLIEQEHIPPHSILAVTF
TNKAAGEMKSRLNAMLAAPLVGLWVGTFHSLCHRLLRRHYKVANLPEQFHILDSEDQARV
IKRVLASLNLDEDQWPVKQAQAFINGNKDEGLRPDHVHILPYGPTRTLVQIYRAYEQACQ
TAGVIDFAELLLRTQELLRDNPDILAHYQQRFQAILVDEFQDTNTIQYAWIRLLAGGGAA
VMAVGDDDQSIYGWRGAKVENIQQFPQDFNSTLVVRLEQNYRSTATILEAANVLINHNNS
RMGKNLWTAGGSGEKIMVYTAFNELDEARFLSERIQMEINNGRSADDIAILYRSNAQSRV
IEEALLRAGIAYRIYGGVRFFERAEVKDTLAYLRMLANPYDDTAFERIVNFPTRGIGEKT
LEELRHLAKGQDISLWQAAHELLKEERLPQRAASSLSKFIQLMEQLQLQIENKELDQQIA
AVLEGSGLYAHFAKIKGDKAESRLDNLQELVNAAKQFRYEQEIEEDLPTLVAFLSHASLE
AGEMQAQEHERSVHLMTLHSAKGLEFPLVFLTGMEEGVFPSKQSLEEPGRLEEERRLCYV
GMTRAMEKLILSYAEVRRQYGREEYHRRSRFIRELPEELLEEIRVKSRFQSPLSQKNMST
AVAQEAGLKLGQNVSHSKFGLGVVLAVEGSGAHTRVQIKFVDHGTKWLVLAYANLTLLED
HPAI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgacagcactgcttgagggcttaaacgagaggcaacgcgaggccgttgctgcacctttg
ggaaataccctggtattggcaggggctggcagtggcaagacgagagtgctggttagccgc
attgcctggttaattgaacaagaacatattccgcctcattcaatactcgctgtgactttc
acgaataaagcagctggcgaaatgaaaagccgtttaaatgccatgttggcagcaccttta
gtgggtttatgggtgggtactttccatagtctttgtcatcgattgttgcgtcgccattat
aaagttgccaatctcccggaacaatttcatattttagacagtgaagatcaagccagagta
ataaaacgcgttttagcctccttaaacctggatgaagatcagtggccggtaaaacaggcg
caggcgtttattaatggcaataaggatgagggtttaagacccgatcatgttcatatcctg
ccttatgggcccacgcgaactctggttcagatttatcgagcctatgaacaggcatgccaa
acggctggcgtaattgattttgccgaattgctgctgcgcacgcaggagttattgagagat
aacccggatatcctcgcgcattatcaacagcgtttccaagccattttagtggatgaattc
caggatacgaataccattcaatatgcctggatacgccttcttgccggaggtggggctgca
gtcatggccgtaggggatgatgatcaatccatttacggatggcgtggagcgaaagtggaa
aacatccagcagttcccgcaagattttaattccactttggtggtgcgcctggagcaaaac
taccgctcaaccgctacgattttagaggcagctaatgttttaattaaccacaataattcg
cgcatgggtaaaaatttatggactgctggaggaagtggcgaaaaaataatggtttatacc
gctttcaatgagctcgatgaagctcggtttttaagcgaacgcatccaaatggaaattaac
aacgggcgaagtgcagacgacattgccattctttaccgctctaacgcccagtctcgggta
attgaggaagcgctcttgcgtgctggcattgcctaccgtatatacggtggcgtgcgcttc
tttgaacgagcagaggtcaaagataccctcgcttatctgcgtatgctggctaatccctat
gacgataccgcctttgaacggattgtgaattttcccacacgtggaataggcgaaaagact
ttggaagagctgcgtcatttggccaagggacaagacatttcattatggcaagctgcacat
gaactattaaaagaagaacgcttaccgcaaagggccgcgagctccctgtcaaagttcatt
caactgatggagcagttgcagctgcagattgaaaataaggaattggatcagcaaattgct
gcagtgctggagggtagtggcttatatgcacatttcgccaagataaagggggataaggct
gaatcacgccttgataacttgcaagaattggtgaatgctgccaaacaatttcgctatgaa
caggaaatcgaagaagacctccccacgctcgttgccttcttatcccatgcgtccctggaa
gcgggtgaaatgcaggctcaagaacacgagcgttcggtgcatctgatgactcttcattcc
gccaaaggcttggagttccctctggttttcctcacgggaatggaggagggtgtcttccca
agcaaacaaagtctggaggagccgggtcgtttggaggaggagcgccgactttgctatgtg
ggaatgacgcgcgccatggagaaattaattttgtcttatgccgaggtgcgaagacaatat
ggacgagaggaatatcaccgtcgctcgcgttttattcgagagttaccagaagagttgctg
gaagagattcgtgtaaaatcgcgttttcagtctcctctttcccaaaagaatatgtcgacg
gccgtagcgcaagaagctggtttaaaactaggtcaaaatgtgagccattccaagtttggc
ttgggtgttgtccttgcggtggaaggtagtggcgcgcatacaagagtgcagattaagttt
gtcgaccatggtaccaagtggcttgttctagcttatgccaatttaaccctgcttgaagat
catccagccatttga
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