Legionella jordanis: NCTC11533_00790
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Entry
NCTC11533_00790 CDS
T06275
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ljr
Legionella jordanis
Pathway
ljr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ljr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11533_00790 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljr03019
]
NCTC11533_00790 (deaD)
03009 Ribosome biogenesis [BR:
ljr03009
]
NCTC11533_00790 (deaD)
Enzymes [BR:
ljr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC11533_00790 (deaD)
Messenger RNA biogenesis [BR:
ljr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC11533_00790 (deaD)
Ribosome biogenesis [BR:
ljr03009
]
Prokaryotic type
rRNA helicases
NCTC11533_00790 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
adh_short
AAA_22
AAA_19
NMT1_2
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
VEH11945
LinkDB
All DBs
Position
1:complement(811725..813392)
Genome browser
AA seq
555 aa
AA seq
DB search
MTQELTNFSALNLSDALLKALEDMKFKTPSPVQAQTIPLLLQGRDVIAQAQTGTGKTAAF
ALPILQRLQPNSQHTQALILAPTRELAIQVAEQFELLSAHQKVSVSVLCGGQEYRRQLKQ
LREGAQIVVGTPGRILDHIDRGTLQLGHLKTFVLDEADEMLRMGFIEDVETILSKLPKEK
QIALFSATMPYRIRQIAESYLNNPASVEIRMETATVKAIEQRFLFASAAQKSDALLRVLA
VEDYQAVIVFVRTKSSTEEVAAVLQQQGHRAMAIHGDISQALREKIIAQFRQGTMDILVA
TDVAARGLDVERVTHVINYDVPHDNETYVHRIGRTGRAGRSGVTILFVTPKESRVLNSIE
RHTRQRIEKIAVPNDHAIHTARQQRFMANIKARLQHENLPSYQHIIEEFLKENEASPVEV
AAALALLLNQDKPWKQELPKAPRAPKEFRGEEKSSKAFSRSSNRGEKSKRQFRDDYPQEL
FRLDVGRVHGVKPGNIVGAIANEAGLESRYITGLKIHEDHSTVRLPQNMPKEVFKDLNRA
WVCGRQLKITSLGTA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagaattaacaaacttttctgcccttaatttatcggatgccttgctcaaggct
cttgaggacatgaagtttaaaacaccatcgcccgtgcaagcacaaaccattccccttctc
ctgcaagggcgtgatgttattgcacaagctcaaactggcacaggtaaaacagctgccttt
gctttacccattttgcaacgcttgcaaccgaattctcaacatacccaagctttgattctc
gcacccacgcgtgaactggcgatccaggtggccgaacaattcgagctgttgagtgcccac
caaaaggttagtgtttccgttttatgcggaggtcaagaatatcgacgccagttaaaacaa
ttgcgcgaaggtgcccaaattgtagtcggtacaccagggcgaatcctggaccacattgat
agaggaaccctgcaacttggacatctcaagacgttcgtgctcgatgaagccgatgaaatg
ttgcgcatgggctttattgaagacgttgaaacgattctttcaaagctgcctaaagaaaaa
cagattgccttattttctgcaacgatgccttatcgcatacgtcagattgcagaaagttat
ttaaataatcctgcttccgttgaaatccgtatggaaacggccacggtgaaagccattgag
caacgttttctattcgcttctgcagcacaaaaatcagacgctttactacgtgtcttagcc
gtggaagattatcaggcagtgattgtgtttgttcgcaccaaaagcagtactgaagaagta
gccgcagtcttgcaacagcaaggacaccgggccatggccatccatggtgacatcagtcag
gctttgcgtgaaaaaattattgctcaattcagacaaggaacaatggacatattagttgct
acggatgtggctgctcgcggtcttgatgtcgaacgagtcactcatgtgattaattatgat
gtgcctcatgacaatgaaacctatgtccatcgtattggccgcacaggccgtgctggacgt
agcggggtgacgatattgttcgtgacgccaaaggaatcacgtgttttaaacagcattgaa
cgccatacccgtcaaagaattgaaaaaattgccgtaccgaatgatcatgcgatccacacg
gcaagacagcagcgtttcatggcaaatattaaagcacgattgcagcatgaaaatttgccg
agctatcaacacatcatcgaagagtttcttaaagaaaatgaagcctctccagttgaagtg
gctgcagctcttgctctgttgctcaatcaagataagccctggaaacaggaattacccaag
gctccccgggcacccaaggaattccgtggtgaagaaaagagcagtaaagcctttagccgc
agcagtaatcgtggagaaaaaagtaaaagacaatttcgcgatgactaccctcaagaatta
tttcgccttgatgtaggtcgcgtccacggggttaaacccggcaatattgtgggtgcaatc
gccaatgaggctggactggaaagtcgttatataaccggtcttaagatccatgaagatcat
tccactgtgcgtcttcctcaaaacatgcccaaagaagtatttaaagatttaaatcgtgct
tgggtttgtggccggcaattaaagatcacctcccttggcacagcctga
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