Legionella jordanis: NCTC11533_01169
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Entry
NCTC11533_01169 CDS
T06275
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ljr
Legionella jordanis
Pathway
ljr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ljr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11533_01169 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljr03400
]
NCTC11533_01169 (alkA)
Enzymes [BR:
ljr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NCTC11533_01169 (alkA)
DNA repair and recombination proteins [BR:
ljr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11533_01169 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
VEH12318
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All DBs
Position
1:complement(1249571..1250482)
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AA seq
303 aa
AA seq
DB search
MQQFQLIPMPPFRLDYTVAALRRRIKNIVDCWDGQSYSRLFLINSQLTCVKVSQDQNTQN
AHLMIECDRNLEVNDQSEITQVLERLLGLNKNLEDFYFFAGKNKPLSILISRFMGLKPPQ
YPSLFEALVNAISCQQISLDAGLEIQNRLIQFIDLSFKNDQQAHYVFPEPIHIANCSIQE
LKQLGYSKNKSETLKRLANAFLEKPDLFAQLRQFSNDDVIHFLCQFKGIGRWTAEYVLLR
GLGRLEVFPRDDVGAQNNLHRLLKLEEKPDANDTAAITASWHPYAGLIYFHLLLQRLFEK
SQT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatttcagttaatcccaatgcctccttttcgcctggactatacggttgcggct
ttaagaagaaggataaagaatattgttgattgctgggatgggcagtcttatagcaggcta
tttttaattaactcacaattaacatgtgttaaggtcagtcaagatcaaaatacgcaaaat
gcccatctgatgattgaatgcgatcgaaacttggaagttaatgatcaaagtgaaatcaca
caagttttagagcggcttttaggactgaataaaaatttagaggatttctatttttttgca
ggaaaaaacaagcctctttcaattctgatttcacgttttatgggacttaaacctccacaa
tacccttccttatttgaagctttggtgaatgcaatctcttgtcagcaaatttctttggat
gcgggtcttgaaattcaaaatcgattaatccaattcattgatttgagctttaaaaacgat
caacaggcacattatgtttttccggagcctatccacattgcaaattgctcaattcaagaa
ttaaaacaattggggtacagcaagaataaaagtgaaactttaaaacggcttgcgaatgcg
tttttggagaaacctgatctattcgcacaacttcgacaattttctaatgatgatgtcatc
catttcctatgtcaatttaaaggaattggccgttggactgcagagtacgtcttgttacga
ggactggggcgtttggaagtttttccgcgagatgatgtgggggcacagaacaatttacat
cgcttgcttaagcttgaagaaaaaccggatgccaacgacacggcggccattacagccagc
tggcatccctatgcgggcttgatttattttcatttgctattgcagcggttatttgaaaaa
tcgcaaacctga
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