Legionella jordanis: NCTC11533_01436
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Entry
NCTC11533_01436 CDS
T06275
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ljr
Legionella jordanis
Brite
KEGG Orthology (KO) [BR:
ljr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ljr03009
]
NCTC11533_01436 (rlmD)
Enzymes [BR:
ljr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NCTC11533_01436 (rlmD)
Ribosome biogenesis [BR:
ljr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC11533_01436 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
TRAM
Methyltransf_11
RrnaAD
TRM5-TYW2_MTfase
MTS
Methyltransf_15
Methyltransf_12
DOT1
PCMT
DREV
Methyltransf_4
Methyltr_RsmB-F
PrmA
Methyltransf_23
CMAS
UPF0020
Motif
Other DBs
NCBI-ProteinID:
VEH12579
LinkDB
All DBs
Position
1:complement(1569589..1570923)
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AA seq
444 aa
AA seq
DB search
MSKRRQKLPTEPKIAEVERFSHDGRGIARLNGKTTFIQGALPGETVSFQYSTIKSDFDEG
RVLDILSSSPSRVEPRCSHYKMCGGCSLQHLNEETQIQEKEALLLNLLQRIGHCEPELIL
PPLRSQSWHYRNKARLSVRFVEKKHASLVGFREKINPRFITEINGCPVLNTQIDEEIKNL
RSLVDSLDDPRAIAQIEVAAGDEVIALIFRNLNELSIADEEKLRAFGQRTKFRLFLQPGG
PDSVQLFYPKESPEFLSYALPQQGITFQFHPTDFTQVNAGLNQLMVTQALQLLNLNAEDV
VLDLFCGLGNFSLPIAKHCAKVVGIEGSQTMVARAQMNAQMNNLHNTEFYCVNLEQIDAL
TNLKNYGFSKLLLDPPRSGAFEIVKSIHKFKFNLIVYVSCNPATLARDADVLVNQQGYRL
KAAGVMDMFPHTSHVESIALFEKG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagaagacaaaaattaccgacagaaccaaaaattgcagaggttgaacgattt
agccatgatggtcgtggtatcgctcgattgaacggcaaaactacattcatacaaggagct
ttaccaggtgagacagtgtcttttcaatacagcacaattaaaagtgattttgatgaaggc
cgggtcctcgacattttatcctcatcaccgtcccgcgtagaacctcgctgctcccattac
aagatgtgtggtggctgctctcttcagcacctcaatgaagaaactcaaatccaggaaaag
gaagcgttgctgcttaatcttctacaacggattggtcattgtgaacctgagctaattctg
cccccccttagaagtcaaagttggcattaccgcaataaggctcgattgagtgttcgcttt
gtagaaaagaaacatgccagtctggtaggttttcgggaaaaaattaacccccgctttatt
actgaaattaatggatgccccgtactcaatacgcaaattgatgaggaaattaaaaactta
aggagccttgttgattcactcgatgatccccgcgcaattgcccaaattgaagttgctgcc
ggagatgaagttattgccttgattttccgtaaccttaatgagttgtccattgcggacgag
gaaaaattaagagcgtttggccaaaggacaaagtttcgattgtttttacaacctggcggt
cctgacagcgtgcagctgttctatccaaaggaaagcccagaatttttaagctatgcttta
cctcaacaaggcattacatttcaatttcatcctacggactttactcaagtgaatgctggt
ttaaatcagcttatggttacccaagccctgcagctcttgaatttgaatgcagaagatgtg
gtgttggatctgttttgtgggttgggcaatttctcacttccaattgccaaacattgtgcc
aaggtagttgggattgaaggaagccaaacgatggtggccagagctcaaatgaatgctcaa
atgaataatttgcacaatacagaattttattgcgttaatttggaacaaattgatgcctta
acaaacctcaaaaattatgggtttagcaaactgctgcttgatccacctcgatcaggtgct
tttgagatcgttaagtcgatacataaatttaaatttaatttaattgtttatgtttcctgt
aatccagctaccttggctagagatgctgacgtgctggttaatcagcaagggtatcgatta
aaggcagcaggggtgatggacatgtttccccatacctcacatgttgaatccattgccttg
tttgaaaaaggataa
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