Legionella jordanis: NCTC11533_02440
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Entry
NCTC11533_02440 CDS
T06275
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ljr
Legionella jordanis
Pathway
ljr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ljr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11533_02440 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljr03400
]
NCTC11533_02440 (xthA)
Enzymes [BR:
ljr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCTC11533_02440 (xthA)
DNA repair and recombination proteins [BR:
ljr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC11533_02440 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
LepB_N
Motif
Other DBs
NCBI-ProteinID:
VEH13563
LinkDB
All DBs
Position
1:complement(2628259..2629029)
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AA seq
256 aa
AA seq
DB search
MLKLASWNVNSLKIRLEQVLNWLGAANIDILAMQETKLVDEQFPSNIFSELGYHSVFKGQ
KSYNGIALVSRHPIEDVVKEIPNFNDPQCRLLAATIAGVRVINLYVPNGSEPSSDKYQYK
LQWLEKTLDFIKDQQRHYSKIAVVGDFNIAPEDRDVHDPAEWQNCVMVSPAERQAFADLL
SLGFADSFRNFLQPEKLFSWWDYRAAAFRRNRGLRIDHILLSEELNSLCISSQIDKEPRK
WERPSDHAPVWIELNH
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacttgcgagttggaatgtgaattcgctaaaaattcgtctcgaacaagtatta
aactggcttggtgcggccaatatcgacatattagccatgcaagaaaccaaactggtggat
gagcaatttcccagtaatattttttccgaacttggttatcattctgtttttaaagggcaa
aaaagttataatggcatagctttggtgagtcggcatcccattgaggacgtggtgaaggaa
ataccgaatttcaatgacccacaatgccgcttgttagccgccaccattgcgggagttcgt
gttatcaatttatacgtgccaaatggctcagagccaagctcagataaataccaatataaa
ttgcaatggcttgaaaagacgcttgattttataaaagaccagcaacgccattactcaaaa
attgcagtggtaggcgattttaatattgctcctgaagacagggatgtgcatgacccggca
gagtggcaaaattgcgttatggtgagtcctgccgagcgccaggcttttgctgatttattg
tctttgggttttgcagacagctttagaaattttctgcaacccgaaaagctatttagttgg
tgggattatcgtgctgcagcatttcgacgaaaccgtgggcttcgcattgatcatatttta
ttgagtgaggagttaaacagtctttgcatctcttcgcaaattgataaggagccgcgcaaa
tgggaacggccttcggatcatgcgcccgtttggattgagcttaatcattaa
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