Legionella jordanis: NCTC11533_02819
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Entry
NCTC11533_02819 CDS
T06275
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ljr
Legionella jordanis
Pathway
ljr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ljr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11533_02819 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljr03021
]
NCTC11533_02819 (rho)
03019 Messenger RNA biogenesis [BR:
ljr03019
]
NCTC11533_02819 (rho)
Transcription machinery [BR:
ljr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NCTC11533_02819 (rho)
Messenger RNA biogenesis [BR:
ljr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC11533_02819 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
VEH13938
LinkDB
All DBs
Position
1:complement(3035318..3036580)
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AA seq
420 aa
AA seq
DB search
MNLSELKQLPIADLVNIAQEMGAENTSRMRKQEVLFAILKAHSHKGEDILGGGVLEVLSD
GFGFLRSEDGSYQAGPDDIYVSPSQIRRFGLRTGDTITGKIRPPKDNERYFALLKVDQIN
YDSPESAKRKILFENLTPLFATERLVMEQGNGSTEDLTARVVDLCAPFGRGQRGLIVSPP
KAGKTLMLQNIAHSIEKNYPECYLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPAQRHV
QVAEMVIEKAKRLVEHKRDVVVLLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRL
YGAARNIEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMEIHLSRNIAERRVFPAINI
NRSGTRREDLLLSPEELHRTWILRKILQSMDECDAIEFLLERMKNHKTNAEFFEAMKRQE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttagtgaacttaagcaattacccattgccgatctagtcaatatcgcacaggaa
atgggggctgaaaatacgtcccgcatgcgcaagcaagaagttctttttgccattttaaaa
gcgcactcccacaaaggtgaagatattcttggcggtggtgttttggaggtattatccgac
ggctttggttttttgcgttctgaggacggttcttaccaggcaggccctgacgacatttat
gtatcccccagtcaaattcgacgttttggcttgcgcacaggtgataccataaccggcaag
attcggcctcctaaagacaacgagcgctactttgccttgttgaaagttgatcaaatcaat
tacgattccccggaaagcgccaagcgcaaaattttatttgaaaacctgactcccttgttt
gctacagaacgccttgttatggaacaaggcaatggcagtactgaagacttgaccgcccga
gtggttgatttatgcgctcctttcggccgtggccaacgtggtcttatcgtttccccaccc
aaggcaggtaagacattaatgctgcaaaacattgctcattccattgagaaaaattacccc
gaatgttatctcatcgtcctgctgattgatgaacggcctgaagaagtaaccgaaatgcag
cgttcagtgaagggtgaggtagtagccagtacttttgatgagcctgcgcaacgccatgtg
caagtggctgaaatggtcattgaaaaggcaaaacgtctggtagaacacaagcgtgatgtt
gtggttctgcttgattccattactcgtttggctcgcgcctacaacacggttgtgccatcc
tcaggcaaagtgttaactgggggtgttgatgccaacgctttacaaagacccaagcgcctt
tatggtgccgctcgtaacatcgaagagggtggaagcctaaccattattgctacggctttg
gttgataccggttctaaaatggacgaagtgatttatgaagagtttaagggtaccggtaat
atggagattcacttaagccgaaacattgctgaacgacgggtcttcccagcgattaacatc
aatcgctctggtacccgccgtgaagatctcttgttaagccctgaagaactccaccgcacc
tggattctgcgtaaaattctgcaatccatggatgaatgcgatgcgattgagttcttgctg
gagcgcatgaagaatcataaaaccaatgccgaattttttgaggccatgaaacgtcaagag
tag
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