Leptospira kobayashii: LPTSP3_g01380
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Entry
LPTSP3_g01380 CDS
T07530
Symbol
rnd_1
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lkb
Leptospira kobayashii
Brite
KEGG Orthology (KO) [BR:
lkb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lkb03016
]
LPTSP3_g01380 (rnd_1)
Enzymes [BR:
lkb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LPTSP3_g01380 (rnd_1)
Transfer RNA biogenesis [BR:
lkb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LPTSP3_g01380 (rnd_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BDA77208
LinkDB
All DBs
Position
1:complement(143612..144829)
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AA seq
405 aa
AA seq
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MQINSNYILVDTAKALELALINLKQSKILSIDTESSGYYTYFPKVCLIQINSNGKNYLID
PLKITNLKGLAPLFADPNILKIFHSAQDDIKALKRDFGFQFTNVADTMISSRLLSMEQSS
LAFVVEHYHKVSLSKVEQKSNWEIRPLQTQQLRYAALDTAYLETIWLKMEEELKRRNLYE
EAKSEFEFTASEDYVEKGGEGFHIAKFPDIINFTPLERRKILELLRYRDEKAKKINKAPF
RVFNNDRLSQAVKEQPNEEKCMEWFGKKDGSEIYKLLISEYSDPIETSELSKRHGEDLNE
EEDKKFQNAKKWRLRVMRIRRMEHSLLPSNKQLIAILRANPQNIEELKALHVFSDWKVEN
YGPSLLTALGGVHNDSMLSKLVSVRSKEAFLAKKRKKQNHSQKEE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcaattccaactatattctcgttgatacggcaaaagctttggagcttgccctc
atcaacctaaaacagtctaaaatcctttctattgacacagaatcctcgggatattacaca
tacttccccaaagtctgcctcattcaaatcaattccaacggaaaaaactatctgatagac
ccgctcaaaatcacaaatttgaagggtttggcaccattatttgccgatcctaacattttg
aaaatttttcattccgctcaggatgatatcaaagcgttaaaacgggatttcggattccaa
tttacgaacgttgcggatactatgatcagctcccgactactttccatggaacaaagttct
ctcgcattcgttgtggaacattatcacaaagtttctctttccaaagtggaacaaaaatcc
aattgggaaatccgtcctttacaaacgcagcaacttcgttatgcggcgttggatacagcc
tatctcgaaacgatctggctcaagatggaagaagaattaaaacgtagaaatttatatgaa
gaagcaaaatcggaattcgaatttacggcttccgaagattatgtggaaaaaggcggagaa
ggattccacattgcaaaatttcccgacatcataaatttcactcctctcgaacgaagaaag
attttggaactacttcgttacagggatgaaaaagcaaaaaaaataaataaagctcctttt
cgtgtcttcaataacgaccgtttatcgcaagccgtcaaagaacaaccgaatgaagaaaaa
tgtatggaatggttcggaaaaaaagacggtagcgaaatttataaactcttaatcagcgaa
tacagcgatccgatcgagacctctgaattgtccaaacggcatggagaagacttgaatgaa
gaagaggacaaaaagtttcaaaacgctaaaaaatggcgccttcgtgtcatgcggatcaga
cgaatggaacattcccttcttccatctaacaaacaattaattgcgattctgagagccaac
ccgcaaaacatagaagaactcaaagcacttcacgtattttcggattggaaagtggaaaat
tacgggccttccctgcttactgcactcggtggagttcataatgattccatgttgagtaaa
ctagtatccgttcgttccaaagaagcctttctcgccaaaaaaagaaaaaaacaaaaccac
tctcaaaaagaggagtga
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