Leptospira kobayashii: LPTSP3_g10530
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Entry
LPTSP3_g10530 CDS
T07530
Name
(GenBank) DEAD/DEAH box family ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lkb
Leptospira kobayashii
Pathway
lkb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPTSP3_g10530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkb03019
]
LPTSP3_g10530
Enzymes [BR:
lkb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPTSP3_g10530
Messenger RNA biogenesis [BR:
lkb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPTSP3_g10530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
Utp25_C
AAA_22
ERCC3_RAD25_C
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BDA78123
LinkDB
All DBs
Position
1:1206912..1208216
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AA seq
434 aa
AA seq
DB search
MQKKIETFSDLSLSPPIQKAVKESGYTQPTPIQIQTIPLLLDGHDLLGCAQTGTGKTAAF
ALPILHRLTSENRKTVPKQPRTLVLVPTRELAVQVHDSFKTYGKYLPIKTAVIFGGVGQS
PQVKSIAAGVDVLVATPGRLVDLIDQRYISLAGIEVFVLDEADRMLDMGFIHAIRKILTL
LPKKRHNLFFSATMPSDIEKLAASMLVNPVRVEVTPASSTVELIKQSVMYVDRDAKKDLL
LKLFKDKALKRVIVFTKTKHGANKVAELLSKSGVAVDVIHGNKSQTARQRALEDFRTGKN
RALVATDLAARGIDIDDITHVINYEIPYVPETYVHRIGRTARAGAQGIAISICEADERSL
IKDIEKVIGVKIPVDKDHGFHSQKVEDHTGKAPKEHGSGQFKQRRGGGGAPPSRGGSSAS
YKKRPPSKKQGRSR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaaaaaatagaaacattctcggatctttccttaagccctcctatccaaaaggct
gtgaaagaatcaggttatacccaaccaactccgatccaaattcaaaccatacccctactt
ttagatggacacgacctcttaggttgtgcacaaaccggaacgggaaaaaccgccgcgttt
gctttgcccattttacatcgattgacatcggaaaatagaaaaacagtcccgaaacaacct
agaactttggtgttagttcctacgcgcgagcttgcggttcaggttcatgatagtttcaaa
acttacggaaaatatcttcctatcaaaacagctgttatattcggaggagtaggccaaagc
ccccaggtaaaatccattgcggcgggagtcgacgtacttgtcgcaactccgggacgtttg
gttgatttgatcgatcaaagatatatttccctcgcgggaatcgaagtattcgtgttagat
gaagctgatagaatgttggatatgggatttattcatgccatccgcaaaattttgactctt
cttccgaaaaaacgtcacaatttgtttttttccgcaaccatgccttcggatattgaaaaa
ttagcggcatccatgcttgtaaatccggttcgcgtggaagtaactcccgcttcatcaact
gtagagcttatcaaacaatccgtgatgtatgtggatcgggatgctaaaaaggatttatta
cttaaactttttaaagacaaagcgttgaagcgtgttattgtttttacgaaaacaaaacat
ggcgcgaataaagttgccgaattgttaagcaaaagcggagtcgccgtcgatgtgattcac
ggaaataaatcccaaacagcgcgccaacgcgcattggaagatttccgtactgggaaaaac
cgtgctttggtagcgactgatcttgccgccagaggaattgatattgatgacatcactcat
gtgatcaattatgaaattccttatgttcccgaaacttatgtacatcgaatcggtagaacc
gctcgtgcaggtgcgcaaggaattgcgatttccatttgcgaagccgatgaacgctcgtta
attaaagatatagagaaagtaatcggagtgaaaattccggtagataaggatcatggtttt
cattctcagaaagtggaagaccatacgggaaaagctcctaaggaacacggatccggccag
ttcaaacaacgtagaggcggtggtggcgctcctccttcccgaggcggttcctccgcgagt
tataaaaaacgtcctccttccaaaaaacaaggcagaagccgatag
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