Leptospira kobayashii: LPTSP3_g11180
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Entry
LPTSP3_g11180 CDS
T07530
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lkb
Leptospira kobayashii
Brite
KEGG Orthology (KO) [BR:
lkb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lkb03032
]
LPTSP3_g11180 (topA)
03400 DNA repair and recombination proteins [BR:
lkb03400
]
LPTSP3_g11180 (topA)
Enzymes [BR:
lkb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LPTSP3_g11180 (topA)
DNA replication proteins [BR:
lkb03032
]
Prokaryotic type
DNA Topoisomerases
LPTSP3_g11180 (topA)
DNA repair and recombination proteins [BR:
lkb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LPTSP3_g11180 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
DUF6602
Phage_portal_3
Motif
Other DBs
NCBI-ProteinID:
BDA78188
LinkDB
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Position
1:1275138..1276739
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AA seq
533 aa
AA seq
DB search
MIAEHISDELGDKKGNMFRIRLKEISKQEVISALKNPSVIDRQLVDSQVARRVIDRIFGF
EISPFLWKYLGGSSLSAGRVQSTVLRWICEREAEIRNFIPEVYVSLKAKVSDKKENFELD
YVLPKSKEKLNEKEAKSVLSKYGVSGKGKALPDTFLTLESIEEKEYKNYPPPPFTTAVLQ
ETASRVFGFSGSHTMKIAQVLFEGKRMKNGEYQGLITYMRTDSTHVTDGKKKIALRFLND
KSPDLIRGVPTKGKEKLHSQGAHEAILPIDPYLTPDSLRSSLKPDEFKLYELIWQRFLES
FLLPETGIERNYIFESEGERWNTKEKEGKSLGFKGFLGKEKLPADPRKGLKPGAKVSVSE
WIWEDKKTSPPSRYTEGSLIQKMEKTGVGRPSTYSQTLVTLMKRKYVFQNQKKIGASALG
EKVNDLLVERFDEIVGESFTKSMEEELDLLAGGQGARVKLIRSFYQRVLELKKLKPTLKK
EKTKDKGKSIPQKGTRVCPTCNEGKVLAKFSKTGKTIYFCSRYPHCDYASYEE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagaacatatctccgacgagcttggtgataaaaaagggaatatgtttcgtatt
cgtttgaaagagatttcaaaacaggaagtaatatccgctttgaaaaatccatccgttatc
gatcggcaactggtcgattcgcaagtcgcaaggagagtgatcgatcggattttcggcttt
gaaatttctccgtttctttggaaatatttgggaggctcatctctttccgcaggaagagtt
cagtctaccgtattacgatggatatgcgaaagagaagcggagattcgaaatttcattcct
gaagtttatgtttccttaaaggcaaaggtttctgacaaaaaagaaaatttcgaattggat
tatgttttacccaaatcgaaagagaagttaaacgaaaaagaagcaaaatcagtgctttcc
aaatacggagtctccggcaaaggaaaagctcttcccgatacttttttgactttggaatcg
attgaggaaaaggaatataaaaattaccctcctcctcctttcactactgcggtgttgcag
gaaacagcttcgcgggttttcggatttagcggatctcatacaatgaagatcgctcaagta
ttgttcgaagggaagcggatgaagaatggagaataccagggactcattacttatatgaga
accgattccacccatgtcacagacggcaaaaaaaagatcgcattacgattcttaaatgat
aaatctcccgatctgatccgaggtgttcccactaaaggaaaggaaaagctgcatagccag
ggagcgcatgaagcgatcctcccgatagatccttatttgactccagatagtttgcgatct
tccttaaagccggacgaattcaaattgtacgaactgatttggcaaagatttctggaaagt
tttctattaccggaaactggaattgaaagaaattatattttcgagtccgaaggggagaga
tggaacaccaaagagaaagaggggaaatcactcggctttaaaggatttttaggaaaagaa
aaacttcccgcggatccccgaaaaggtctaaaacccggagcaaaggtttccgtttccgaa
tggatttgggaagataaaaaaacttcacctccttctcgttatacggaaggaagtttgatc
caaaaaatggaaaaaacgggagtgggcagaccttccacttattcacagactcttgtaacc
ctgatgaaacgtaagtatgttttccaaaaccaaaaaaagataggagcgtcggcgttaggc
gaaaaagtaaacgatctgcttgtcgaacgattcgatgaaattgtaggagaaagttttaca
aagtcgatggaagaagaattggacctgcttgcaggagggcaaggtgcccgtgtcaaactg
atcagatcgttttatcaaagagttttggaattaaaaaaattaaaaccgactcttaaaaaa
gaaaaaactaaggacaaagggaaatcgattccgcaaaaaggaaccagggtctgtccaact
tgtaatgagggaaaggttttagccaagttttcaaaaacaggaaaaacgatctatttttgt
tcccgttatccgcattgtgattatgcttcttatgaagaataa
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