Leptospira kobayashii: LPTSP3_g12510
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Entry
LPTSP3_g12510 CDS
T07530
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lkb
Leptospira kobayashii
Pathway
lkb03410
Base excision repair
lkb03430
Mismatch repair
lkb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lkb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPTSP3_g12510 (recJ)
03430 Mismatch repair
LPTSP3_g12510 (recJ)
03440 Homologous recombination
LPTSP3_g12510 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkb03400
]
LPTSP3_g12510 (recJ)
DNA repair and recombination proteins [BR:
lkb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LPTSP3_g12510 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LPTSP3_g12510 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LPTSP3_g12510 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BDA78321
LinkDB
All DBs
Position
1:complement(1439623..1441593)
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AA seq
656 aa
AA seq
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MLNVAKVRFGPSLSEIRAQVSSKKPLLRYLVDSREELKKIPPHEFLNTSFAYLHSPFSLP
DIRETIEIILEYSKNKKHIVLYGDRDADGVSSTSSLAFFLKSHPYFKEVPISVLNSSESD
PYGLCAEALEKINKVNPAPDLLITLDFGSSQADEIDQLTKKGIRVIVLDHHEIPERIPEK
TFLVNPRRLDSRYPEKKICTAVLAFKIIQAVLFRLSDEFDKIYFKEENGETIYFQNGIRV
SELTSPSLSQIVSHPKENLFPFPERPSAKGELPDDDERFLFYTQCLKIQDFFESLEEEVD
LAGIGTITDLMPLGGENRMIVKLSLQSLLTFLDPKLPKRRYGIRSLLGQLSLNPKNITAK
DLGWSIGPLLNSAGRMGKTEEAVNLLLSEDLPSADKKAKVLAGINEERKDRTKRNLDRAD
RYFKRKTERTEHPIVFCYEPDMEPGVSGIVATRMVEDFKRPAVFIAPDNGDARGSIRSYS
KENVIELLNLVSEHLIHFGGHPEAGGFSVELDKIPDLEKAMYEKSKLWLAEEKETIDKYI
LSTDITVIPEELNDKLYKEWKPLEPFGQGNPDVKIAIKGIKPIHLTPLSGGKHIRFNILG
SGSMKFILWNKGDEFQKAVSHTDKLDLIGKLEENYFMGKSSIQFVVDWFGEATAVE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatgtagcaaaggttcggtttggaccgagtctgtccgaaatccgagcccaagtc
tcttcaaaaaaacctcttcttcgttatttggtcgatagcagagaagagttgaagaaaatt
ccaccccacgaatttttaaataccagtttcgcttacctccattctccattctctttacct
gatataagagaaacgatcgaaatcattttagaatattctaaaaacaaaaagcacattgtt
ctctacggagacagggatgcagatggggtttcctctacttcctcgcttgcttttttttta
aaatcccatccttattttaaagaagttcccatttccgttttgaattcttccgaaagcgac
ccttacggtttatgtgccgaagccttggaaaaaataaataaggtgaatccggctcccgat
ttactcatcactctcgatttcggatcttcacaagcggatgaaatagaccaattgacaaaa
aaaggaatcagagtgatcgttttggaccatcatgaaattccggaacgaattcccgaaaag
accttcttggtgaatcccaggcgtttggactcacgttatcctgaaaaaaaaatctgcacc
gctgtgcttgcattcaaaatcattcaggcagtcttatttcgattgagtgacgagtttgat
aagatttatttcaaagaagaaaacggagaaacaatctattttcaaaacggaatcagagtt
tccgaactcacttccccttctttatctcaaatcgtttcacatccgaaggaaaatctattt
ccctttccggaaaggccttccgccaaaggagagttacccgatgatgacgagagattttta
ttttacacacagtgtttgaagattcaggattttttcgagtctctggaagaagaagtggat
ttggccggtataggaaccatcacggatcttatgcctctcggcggagaaaaccgaatgatt
gttaaactttccttacaatcattattgacttttttagatccgaaacttcccaaaaggcgt
tacggaatcagatctttactggggcaattgtctctaaacccgaaaaatatcaccgcaaaa
gacttaggctggtcgattggcccgcttctcaattccgcaggcagaatggggaaaacggaa
gaagcagtaaatttattattgtccgaagatcttccttccgccgacaaaaaagccaaagtc
cttgccggcatcaatgaagagagaaaagacagaacgaaaagaaatctggaccgggcggat
cgttattttaaaagaaagacggaacgaacggaacacccgattgtattttgttatgagcct
gatatggagcccggggtcagcgggatcgtagccacccggatggtggaagatttcaaaaga
ccggcagtcttcattgcaccggacaatggagacgcaagaggatccattcgatcgtatagc
aaagaaaatgtgatcgaacttttgaatcttgtgtcagagcatttgattcatttcggaggc
caccccgaggcaggtggattttcagtggagctggacaaaataccggacctagaaaaagcg
atgtatgaaaaatccaaactctggttagccgaagaaaaagaaaccatagacaaatacatt
ctttctaccgatatcactgtgattcctgaagagctgaatgataaactttataaagaatgg
aaacctttggaaccgttcggtcagggaaatccggacgtaaagatcgcaatcaaaggaatc
aaaccaattcatctaacacctctcagtggaggaaaacacattcggttcaatatacttgga
tcgggttcgatgaaattcatcctatggaacaagggagacgagttccaaaaagctgtctct
cacacggacaaactggatttgatcggaaaattggaagaaaactattttatgggaaaatcc
tccatccagttcgtagtagattggttcggcgaagctactgcagtcgaataa
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