Leptospira kobayashii: LPTSP3_g13000
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Entry
LPTSP3_g13000 CDS
T07530
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lkb
Leptospira kobayashii
Pathway
lkb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lkb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPTSP3_g13000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkb03400
]
LPTSP3_g13000
Enzymes [BR:
lkb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LPTSP3_g13000
DNA repair and recombination proteins [BR:
lkb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPTSP3_g13000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Swi3
Motif
Other DBs
NCBI-ProteinID:
BDA78370
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All DBs
Position
1:1492572..1495982
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AA seq
1136 aa
AA seq
DB search
MPIQHFTSLSLHDISSLLSDNLWEERKRYPLKAPTVIIPNLNMRRWLDLNLARIGGLSTQ
VRYQFLERFFEEYYLGRAGKEYDPLVRTFPGPGNIQKKILSYLVRNKEKEEFVFLSSYLT
NIPRVFSLSAKLALLFRDYELNRSGWIEEWAKENGIEIPSVSKKKSKFPHDNDYLRMEKK
IYQDIFLDPSLSDENLQSSIHFFLKESKKKKGNFKSEFSSVHLFCLSNLADTYLGILESI
SETDDFPVYIYQFHNGFSHIPKDSLIPVHWSRPQVQTHSRIRNMGKFSQKDITPKQTYPE
GLGALRKLLSGQLKEPYSLSGNSRTDDFSVRFWNAPSAFREMEAVANDILFKLNRDPGLS
YVDFAILLTDIKTYRPTVEWVFDGGLLIQSSETSEPIRKKIPYSLTDIKASDSSYLYQGC
MGFWDLCSGMGITKDSFLSLLHNPLFLSKLNIDNETLLRLEELVELTGVQYEEKGREEEG
FQISRGLRRIRLSAVLDSDSSWKNYEEILLPMESEEDPVILTEIWELVFQTRNRLQLILE
KGYWGKDEFLAIREILESLFDLSEETGELHLFHSLLESMSEWEGLENLSEKDGIQFLRFV
TEQSFDKIPYRKGDYLTGGVTIFLLQPMRPIPFKHVYILGLGEGKFPGSKDLSPLNLRKD
VPEEWDINRKEVGESLFWESLHSAGESITLSYVGKNIQEDKSFEPCSSLYEIMFGLGIET
ATEIPLHSYSKLYTHKEDELKQGLLSFDFSKHWLSLDRKAHPLLSRFQDPSSLETISKLT
SSRIIHLKEISQFLEDPLSAYLSKRMGMYLNEEETDREIGEMFTIQELGESMILKSIYEH
MIPDLVVEGDWPWNEDRLKELLSGEIKKEKSRAKFPQSVYAEVKEVELLRFLSITNEIFK
TWNSEFAGGTYHRFFSLGDTGLSETVCKKIPSLKIGAEEIVGEWEHIIEKNGIYFWILPK
LLDKDPEVDWNGFTDYWKKMSFPFLSSLAVLSSEVSDFRIYSFRSRPKGDPKKKGEDLFT
LRYKTKDKKENLSYLSKLISLYQKEEPYFFPRYAFLEYYVSVEKASGKNPNLPNLTEVYE
DEVSWKRYLNEEVDAIQSGLDSLVRLYPDLHSMILESSLGFAKDFYQPFLDWRIHL
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgccaatacaacattttactagtctttctttacacgatatcagttcgcttttatcggac
aatttatgggaggagagaaaaaggtatcctctcaaagctccgacagtaatcattcctaac
ctaaacatgcgtaggtggttggatctgaatttggcaagaatcggaggactgtcaacgcaa
gtaaggtatcagtttttagaaaggttttttgaagagtactatttgggtcgcgcagggaag
gaatatgatcctttggttcgtacatttccgggcccaggaaacattcaaaaaaaaattctg
tcctatcttgttcgtaataaagaaaaggaagaattcgtttttttatcatcttatctgaca
aacattcccagggtattttccctaagtgcaaaacttgcattgctctttcgggactatgaa
ttgaatcgttccggatggattgaggaatgggcgaaagaaaacggaatagaaattccttcc
gtatccaagaaaaagtcgaagtttccacatgacaatgattatctgagaatggaaaagaaa
atctatcaggatatatttttagatccttccctttcggatgaaaacttgcaatcttcgatt
cattttttcctgaaggaatcgaagaaaaaaaaaggaaatttcaaaagcgaattttcttcc
gttcatttgttctgtctttccaatcttgcggatacatatttgggtattttggaatccatt
tcggaaacggatgatttcccggtttatatctaccagtttcataacgggttttcgcatatt
cccaaagatagtttaatccccgttcattggtcaagacctcaggtccaaacacattcccgc
attaggaatatgggtaaattctcccaaaaggatattactccgaaacagacatacccggaa
ggtctgggagcattgagaaaattattgtcgggacaattgaaggaaccgtactctttgtcc
ggtaattcccggacagacgatttttcggtgcgtttttggaatgctccttccgcatttcgg
gaaatggaagcggtagcaaatgatattttattcaaattgaaccgggaccccggactttcc
tatgtggatttcgcaatcctattgacggatatcaaaacctacagaccgacagtagaatgg
gtgtttgacggaggactcctcatccaaagttcggaaacctcggaaccgatccggaaaaaa
attccatactcactaaccgatattaaagcgagtgattcttcctatctttatcaaggttgt
atgggcttttgggatttatgttccggtatgggaattacgaaagattcctttttatctttg
cttcataatcctttgtttctctctaaattgaatatcgataatgaaactcttctaagactg
gaagagttagttgaactaacgggtgttcagtatgaagagaagggcagggaagaagaaggg
tttcaaatatccagggggctacgcaggattcgtttgtccgcagttttggattccgattct
tcctggaaaaattacgaagagatacttttgcccatggaatcggaagaagatcctgttatc
ctgaccgaaatttgggaacttgtttttcaaacaagaaacagactacaattgattttggag
aaaggatattggggaaaggatgagtttttggcaatccgtgagatattggaatccttattc
gatctttcggaagaaacgggagaattgcatttgtttcattccttattggaatcgatgtcc
gagtgggaaggattggaaaatttatcggaaaaggacggcattcaatttcttcggtttgtc
acggaacagtcgtttgataaaatcccttaccgtaagggagattatctgacgggtggagtg
actattttccttttgcagcctatgaggcccattccctttaaacatgtttatatactcgga
ctcggagaaggaaaatttccgggctcaaaagatctctctcctttgaatttaagaaaagat
gttcccgaagaatgggatatcaaccgtaaggaagtgggcgagtctttgttttgggagtca
ttgcattccgcaggtgaatcgattactctaagttatgtggggaaaaacatacaggaagac
aaatcgttcgaaccttgttcgagcctttacgagataatgttcggtttgggtattgaaacc
gcaacggagattccgctccattcttacagtaaactttatactcataaggaagatgaattg
aaacaaggtttgcttagctttgatttttcaaaacactggctttctctggatagaaaggct
catccattactttcccgtttccaggatccgtcttctttggaaaccatttccaagctcact
tcttcccgaatcatccacttgaaagaaatttcccaattcctggaagatcctctttccgca
tacctaagcaaaagaatggggatgtatttaaacgaagaggaaaccgatagagagattgga
gaaatgttcaccatacaagagcttggtgaatctatgatcttgaaatcaatttatgaacat
atgattcccgatttggtagtagaaggggattggccttggaatgaagatcgtttgaaggaa
ctgctttccggtgaaataaaaaaggaaaaatcgagggcgaagtttccgcaatccgtttat
gcggaagtgaaagaagtggaattgttgcggtttctttctatcacgaatgaaatatttaaa
acatggaactccgaatttgcaggaggaacttatcatcgttttttcagcttaggtgatacg
ggactttccgagacggtatgtaaaaagattccttctttgaaaataggtgcggaggaaatc
gtaggcgaatgggaacatataattgaaaagaacggaatctatttttggattttaccaaaa
cttttggacaaagatccggaagtggattggaacgggttcactgattattggaaaaaaatg
agttttccttttttgagttctttagccgttcttagttcggaggtatcagattttcgaatc
tattcttttcgttccagacctaaaggagatcctaagaaaaaaggggaagacctttttact
cttcgttataagacaaaagataaaaaggaaaatctttcttatctttccaaactcatttct
ctttatcagaaagaggagccttatttttttccaaggtacgcatttttagaatattatgta
agcgtggaaaaagcttccggcaaaaatcccaatcttcccaacctaaccgaagtttacgaa
gatgaagtttcctggaaaagatatttgaacgaagaggtagatgcgattcaatccggtttg
gattctctcgttcgtttgtatcctgacttgcattcgatgattttggaatcttccctcggt
tttgcaaaagatttttatcaaccttttctggattggagaattcatttatga
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