Leptospira kobayashii: LPTSP3_g13320
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Entry
LPTSP3_g13320 CDS
T07530
Symbol
pcnB_2
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lkb
Leptospira kobayashii
Pathway
lkb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPTSP3_g13320 (pcnB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkb03019
]
LPTSP3_g13320 (pcnB_2)
Enzymes [BR:
lkb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LPTSP3_g13320 (pcnB_2)
Messenger RNA biogenesis [BR:
lkb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LPTSP3_g13320 (pcnB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
PolyA_pol_arg_C
Motif
Other DBs
NCBI-ProteinID:
BDA78402
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All DBs
Position
1:1543629..1545155
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AA seq
508 aa
AA seq
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MDESNMFKFLTSLFRKKADSVDSFLMYPEGKRYYRETHSIRRTNIDEDAIKIINRLNKFR
YKAYLVGGGVRDLLMGKRPKDFDIVTSATPNQIKRVFNNCRIIGKRFKIVHIIFKGKIIE
VSTFRSLPEHRLEKHKAENDYLIKRDNSFGTAKEDAARRDFTINSLFYDPKNDSILDYVG
GFDDIQKKIVRVIGDPDISFKEDPVRMLRAVKFSVLLGLDIEKKTKLAIKKNRLEMEKSS
SARLLEEYNKMFRTWKTSQIFQGLAENFLFEVLFKELVDKLKKNDPEWREHFLETPLGKR
LVITDQLLSAREEMTPAIFYSLIFYDLVSDIFSSDEGHLAHNIKDALQPVFERMGIPKRE
QDNLVKVFISQPRFLVTDDERERQNTFFKKKDYFYDAFMVYKIVALSENNEAAVQSAFFW
EISLRQRPKPDSHQFGQQNRKKEKKRPPRKKMRGGRGPHPGRNPNGQDQGSDSESRGNQN
QPDSDTPREPRDQNPRRPEKPPADDSED
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaatcgaatatgtttaaatttctcacatctcttttccgaaagaaagccgactct
gtcgattcctttttgatgtatcccgagggaaagagatactaccgagagacacattccatc
cgccgtacaaacattgatgaagatgccataaaaatcatcaaccgtctgaacaagtttcgc
tataaagcgtatttggtaggtggaggggtgcgtgatctcctcatgggtaaacgcccaaaa
gattttgatattgtgactagtgccacaccgaaccagatcaaaagagtgttcaataattgc
cgcatcattggcaaaagatttaaaattgtacacatcatttttaagggtaagatcattgaa
gtttccactttccgttccctcccggaacacagattggaaaaacacaaggctgaaaacgat
tacttaatcaaaagagacaattccttcgggaccgcaaaggaagacgccgctagacgcgac
tttaccatcaattcattgttctacgaccctaaaaacgattccattctggattacgtcggt
gggtttgatgacatccaaaaaaaaatcgtccgagtgatcggcgatccagacatttctttc
aaagaagatccggtcagaatgctcagagcagtaaagttctccgtattactcgggttagat
attgaaaagaaaacaaaacttgctatcaaaaagaatcgcctggaaatggagaaatcctct
tccgcaaggttacttgaagaatacaataaaatgttccgcacttggaaaacttctcaaatc
ttccaaggtttggctgaaaattttctttttgaagttctattcaaagaactagttgataag
ctgaaaaaaaacgatccggaatggagagaacattttctcgaaactcctctcggaaaacgt
ttagtcatcacggatcagttgttatctgccagagaggagatgactcctgccatcttctat
tccttgattttttatgatttggtaagcgatatcttttcctccgacgaaggacatcttgcc
cataatatcaaagatgctcttcaacctgtgttcgagagaatgggaattccgaaacgggaa
caggacaatcttgttaaggtgtttatcagccaacctagatttctcgtgactgatgatgaa
agagaaagacaaaatactttcttcaaaaagaaagattacttctacgatgcctttatggtg
tacaagattgtcgctctttccgaaaataacgaagctgcagttcaatccgctttcttttgg
gaaatttccttacggcaaagaccgaaaccggattcccatcagttcggccaacaaaaccgt
aaaaaagaaaagaaacgtccgcctcgcaaaaaaatgaggggaggacgaggaccgcatccc
ggaagaaacccgaatggacaagaccagggttcggattccgaatcccgaggaaatcaaaac
caaccggattccgatactccgagagaacctagagaccagaatccacgtcgcccggaaaaa
ccaccggcggacgatagcgaagattaa
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