KEGG   Leptospira kobayashii: LPTSP3_g20250
Entry
LPTSP3_g20250     CDS       T07530                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lkb  Leptospira kobayashii
Pathway
lkb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lkb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LPTSP3_g20250 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lkb03021]
    LPTSP3_g20250 (rpoA)
   03400 DNA repair and recombination proteins [BR:lkb03400]
    LPTSP3_g20250 (rpoA)
Enzymes [BR:lkb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LPTSP3_g20250 (rpoA)
Transcription machinery [BR:lkb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LPTSP3_g20250 (rpoA)
DNA repair and recombination proteins [BR:lkb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LPTSP3_g20250 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 DUF4175 GCD14 DUF6261
Other DBs
NCBI-ProteinID: BDA79095
LinkDB
Position
1:complement(2302162..2303139)
AA seq 325 aa
MSPKNLLKGFKRPKKIEFTTDVNTPNYGKFVAEPFERGIGTTIGNSLRRTLMSSIEGAAI
SAIRIEGVTHEFAYIEGVAEDVTRIILNLKQVRIKYEPEDKEASKVIHIELKGAGYFRAG
DLAIDSSIEIMNPDLHIATLNEDANLILDLEIQRGRGYVPAEDKKKDIEVLGTIPIDSIF
SPIQKVLFEVSETRVAQRSDYEKLTLEVWTDGSVSPEDAVAQAAKILKDHLTVFINFEEE
IEEEEEELDEADEKLKASLSKHVEELELSVRATNVLRSLEIDFIGELVKRSEEEMTKSKH
FSEQSLQELKIKLQSLGLSFGMRDF
NT seq 978 nt   +upstreamnt  +downstreamnt
ttgtccccaaagaatttactaaaaggttttaaaagaccgaaaaaaatcgaattcactact
gatgtgaatactcctaattatggtaagtttgtagccgagcctttcgaaagagggattggt
acaaccatagggaattctttaagaagaactcttatgtcttcgatcgagggagcggctatt
tccgcaatccgaatcgaaggtgtgactcatgagtttgcttatattgagggagttgcggaa
gacgtaactcgtatcatcctcaacctcaaacaagttcgtatcaaatacgagcctgaggac
aaagaagcaagcaaagtcattcatattgaattgaaaggtgctggatatttccgcgccggg
gatttggcgattgattcttccatagaaatcatgaacccggatcttcatattgctactttg
aacgaagacgcaaatcttatccttgatttggaaatccaaagaggaagaggatatgttcct
gcagaagacaaaaagaaagatatcgaagttttgggaacgattcctatcgactctatcttt
tcaccgattcaaaaagttctttttgaagtgtctgaaactcgtgtagcgcaaagatccgat
tatgagaaattaactttagaagtttggacagacggttccgtatctcccgaagacgcggta
gctcaagctgcgaaaattttaaaagatcatttaaccgtattcatcaactttgaagaagaa
atcgaagaagaagaagaagagttggatgaagctgacgaaaaattaaaagcatccctttct
aaacatgtggaagaattggaattatccgttcgcgcaacgaacgttttgcgaagccttgaa
atcgattttatcggtgagcttgtgaaacgcagtgaagaggaaatgacgaaatccaaacat
tttagtgaacagagtttgcaagaattaaagatcaaactacaatcgcttggtttgtctttc
ggaatgagagatttttaa

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