Leptospira kobayashii: LPTSP3_g36130
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Entry
LPTSP3_g36130 CDS
T07530
Symbol
rhpA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase RhpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lkb
Leptospira kobayashii
Pathway
lkb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPTSP3_g36130 (rhpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkb03019
]
LPTSP3_g36130 (rhpA)
03009 Ribosome biogenesis [BR:
lkb03009
]
LPTSP3_g36130 (rhpA)
Enzymes [BR:
lkb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPTSP3_g36130 (rhpA)
Messenger RNA biogenesis [BR:
lkb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPTSP3_g36130 (rhpA)
Ribosome biogenesis [BR:
lkb03009
]
Prokaryotic type
rRNA helicases
LPTSP3_g36130 (rhpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Helicase_RecD
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BDA80683
LinkDB
All DBs
Position
2:2342..3754
Genome browser
AA seq
470 aa
AA seq
DB search
MPLVLEGKDLIAQAQTGTGKTAAYGLPCLNRIDVKSGMQVLVLTPTRELALQVSDELYRL
GKNVGIKTTTIYGGASYSKQISQVTKGAQVAVATPGRLLDLLKGKELKNFKPNMVILDEA
DEMLDMGFLEDIESIFGFLPAERQTLLFSATMPDAIKKLAGRYLNQPAHVKIAATEKSSK
NIEQVYYIIDEQERDNAVVRILDYENTYKAIIFTKTKKEADDLKANLGFKGYPVEALHGD
LSQKQRELVLKSLHDGRIRILVATDVAARGLDVKDLSLVINFHLPFDSESYTHRIGRTGR
AGKTGKAITLVTTRESRALHRLKGTSGTGLTIAALPTKKEVQAKRSEDFITKLLETEINE
EAEALFAKLSESQDSKEVSLKILSQILDKVKISGPEKIGKHPSEWNESAPSGGGGAKRRG
GTGGGSRGGRSNSSGGSSYGGRSGGGSSRSTPASKSGGDRGGKPQRFRNK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgttctcgaaggaaaagacctgatagcacaggcacaaacaggaaccggtaaa
accgcagcttatggacttccatgcttaaatcgcatagatgtgaaaagcggtatgcaagtt
ctcgttttaacaccaacaagagaacttgccctccaagtatcagacgagctttaccgctta
ggtaaaaacgtcgggatcaaaaccactactatctatggtggtgcatcttattccaaacaa
atctcccaagtcaccaaaggtgcacaagttgccgtggcaactcctggtagattattggat
ctactcaagggcaaagagttaaaaaatttcaaacctaatatggtcatcctagatgaagcg
gatgaaatgttggatatgggatttttggaagacatcgaatccattttcggattccttcct
gcagaaagacaaactctcctgttttcggcaacgatgccagatgctatcaaaaaattagca
ggacgttacctcaaccaacccgcgcatgtaaaaattgcagcgaccgaaaaatcttcgaaa
aacatcgaacaggtgtattacatcatcgatgaacaagaaagagacaacgcagtagttcgt
attttagattacgaaaacacgtataaggcgatcatttttacgaaaactaaaaaagaagcc
gacgatctgaaagcgaatcttggattcaaagggtatcctgtggaagcactccatggtgac
ttgagccaaaaacaacgggagttggttttgaaaagtcttcatgacggcagaatcagaatc
cttgtagcgaccgatgttgcagcacgcggactagatgtaaaagatctatctctcgtaatc
aacttccatcttcctttcgatagcgaaagttatacgcatagaatcggaagaacaggacgt
gcaggaaaaaccggtaaagccatcactctggtaaccacaagagaatcaagagcacttcat
aggctgaaaggcacctccggaacaggacttacgattgccgctcttcctaccaaaaaggaa
gtccaagcaaaaagaagtgaagatttcatcactaagcttttggaaacggaaatcaacgaa
gaagcggaagctcttttcgcaaaactttccgaatcccaagactcgaaagaagtctctctg
aaaatcctttctcaaatccttgataaagtaaaaatttcagggcctgaaaaaatcggtaaa
cacccttccgagtggaatgagtccgctccttccggcggtggtggtgcaaaacgaagagga
gggaccggagggggaagccgaggtggcagatccaacagttccggtggttcttcatacggt
ggaagaagcggtggcggatcgtccagatcaactcctgcttctaaatccggtggggatcgc
ggaggaaaacctcagcgttttcgaaataagtag
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