Lactobacillus kefiranofaciens subsp. kefiranofaciens: WANG_0212
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Entry
WANG_0212 CDS
T01526
Symbol
hupB2
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
lke
Lactobacillus kefiranofaciens subsp. kefiranofaciens
Brite
KEGG Orthology (KO) [BR:
lke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lke03032
]
WANG_0212 (hupB2)
03036 Chromosome and associated proteins [BR:
lke03036
]
WANG_0212 (hupB2)
03400 DNA repair and recombination proteins [BR:
lke03400
]
WANG_0212 (hupB2)
DNA replication proteins [BR:
lke03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
WANG_0212 (hupB2)
Chromosome and associated proteins [BR:
lke03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
WANG_0212 (hupB2)
DNA repair and recombination proteins [BR:
lke03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
WANG_0212 (hupB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_bac_2
Nrf1_DNA-bind
Motif
Other DBs
NCBI-ProteinID:
AEG39907
LinkDB
All DBs
Position
complement(221211..221495)
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AA seq
94 aa
AA seq
DB search
METISKKQLVDQIAEKTDATKSDINKVLDAYIETVKSNVAEGNKVQMVGFGAFELRHRAA
RKGRNPQTGKEIEIAATNVPAFKPGKTFKAEVNK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggaaactatttctaagaaacaattagtagaccaaattgctgaaaagactgatgctact
aagagcgacatcaacaaggtcttagacgcttacatcgaaactgttaagagcaacgttgct
gaaggcaacaaggttcaaatggttggtttcggtgcttttgaacttcgtcaccgtgctgct
cgtaagggtcgcaacccacaaactggcaaagaaattgaaatcgctgcaactaacgttcca
gcattcaagccaggtaagactttcaaggctgaagttaacaagtaa
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