Lactobacillus kefiranofaciens subsp. kefiranofaciens: WANG_0490
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Entry
WANG_0490 CDS
T01526
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
lke
Lactobacillus kefiranofaciens subsp. kefiranofaciens
Brite
KEGG Orthology (KO) [BR:
lke00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WANG_0490 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lke03021
]
WANG_0490 (rpoD)
Transcription machinery [BR:
lke03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WANG_0490 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Myo5a
DpdG
DUF2070
Motif
Other DBs
NCBI-ProteinID:
AEG40185
LinkDB
All DBs
Position
526762..527874
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AA seq
370 aa
AA seq
DB search
MAEKGTTQKLSLNKMVKKVVKDVKKDKSITEKDFTARLIKPYNLQGKAVDQLVQEFEDNR
ISIVDEKGEPSKLALKKQKDVEKEELKDMSAPSSVRMNDPVRMYLKEIGRVPLLTADQEI
SLAKRIENGDEEAKQELAEANLRLVVSIAKRYVGRGMSFLDLIQEGNMGLMKAVDKFDYR
LGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEE
IGAEMNMPTNKVRDILKIAQEPVSLETPIGEEDDSHLGDFIEDKEATSPEQHASYEMLKE
QLEQVLETLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPS
RSSQLHDFMD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaaaagggaactacacaaaaactatctttgaataagatggttaaaaaagttgta
aaagacgttaaaaaggacaagtcaattactgaaaaggatttcactgctcgtctgattaag
ccgtataacttacaaggtaaggctgttgatcaactggttcaagagtttgaagataacaga
atcagtattgttgacgagaaaggtgaaccttcgaagttagccttaaagaaacaaaaagat
gttgaaaaagaagaattaaaggatatgtctgctccttcaagcgttcgaatgaatgatccc
gttcggatgtacttgaaggaaattggacgtgtacctctacttacagctgatcaagaaatt
tcgcttgctaaaagaattgaaaacggagatgaagaagctaagcaagaattagctgaagct
aaccttcgtttagtagtttctattgctaagcgttatgtaggtcgtgggatgtcttttctt
gatttaattcaagaaggtaacatggggttgatgaaggcggtagataaatttgactatcgt
cttggctttaaattctcaacttatgcaacttggtggattagacaggctattactcgtgca
attgccgatcaagctcgtacgattagaatccctgttcacatggtagaaaccattaataag
ttgatcagaattcaacgtcaattgttgcaagatttgggtcgtgaaccaactccagaggaa
attggtgctgaaatgaatatgccaactaataaagtgcgggatattttaaagattgcacaa
gaacctgtttccttggagacccctattggtgaagaagatgattctcacttaggagacttt
atcgaagataaggaagcaactagtccagagcaacatgcttcttatgagatgttgaaagag
caactagagcaagtacttgagactttaactgaccgtgaagaaaatgtcttacgtttgcgt
tttggtctagatgatggtcgtactcgtactttggaagaagtgggtaaggtatttggcgta
acgcgtgaacgtattcgtcagattgaagctaaggcattacgtaaattgcgtcatccgagt
cgttcgagtcaattacatgattttatggattaa
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