KEGG   Lactobacillus kefiranofaciens subsp. kefiranofaciens: WANG_0586
Entry
WANG_0586         CDS       T01526                                 
Name
(GenBank) possible type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lke  Lactobacillus kefiranofaciens subsp. kefiranofaciens
Brite
KEGG Orthology (KO) [BR:lke00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lke02048]
    WANG_0586
Enzymes [BR:lke01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     WANG_0586
Prokaryotic defense system [BR:lke02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   WANG_0586
SSDB
Motif
Pfam: T1R_D3-like SWI2_SNF2 ResIII HSDR_N EcoR124_C DEAD SNF2-rel_dom Helicase_C DIL Peptidase_S24 DUF6671
Other DBs
NCBI-ProteinID: AEG40281
LinkDB
Position
complement(647378..650422)
AA seq 1014 aa
MEQEAVIEEKLINQLTRKDSKWTLREDLKNEDDLWDNLFKILSRSNKDVLKDVPLTDNEK
AVIKSKIIQPTFYKAAEWLAGVNGQIRLAIQRDNTKLGTADFLVINNNDIAGGNSTYEVV
HQIQFHKRREIDRNRRGDVTLLINGLPMIHIELKNRAHSPKEAFNQIQKYIDEQMFNGIF
STIQMFVVSNGSYTQYIAAGQQLREKFLTTWVDKNNKPVQNYLDFAREVLSIPAAHHMVA
DYIVLDSIQHSIIVLRPYQIHAIQAIERASLGIKIIDGKEKREEPYSGFVWHTTGSGKTL
TSYKVAHNLLKIPSIEKTVFLIDRNDLDTQTSQAFETYAQNDSIEVESTENSYVLARKLT
SSDKKVVVTTRQKMQALFKRIKQDQEQKRLYKKLKNVKLAFIVDECHRAVSPDQKNEIDA
FFAKHPLWYGFTGTPIFDENAREAKGRNARTTEQQYGKCLHKYTIKDAIRDKAVLGFQVE
EEGSNSVNTDESDIDARKKEYLSLSHMKAVVKRVIENSYRKLGIYNKNSRGYSYDAIFTT
SSIKQAQKYYRIFRDVINGTDPDIQIPSYIKKVLPDFPKVAITYSVGENGDGDEANQKEM
KRSIEDYNNMFDTHYSMEELAAYNTNVNDRLARKKAEFKPRVQQLDIVIVVDRLLTGFDA
PCLSTLFIDRPPMSYKDLIQAFSRTNRIFDKDKKYGQVVTYQYPKKFEADINAAIALYTE
GGSSEILAPTWDESIIKFKKAEKQIIKYDNHQGIPIAEAPLEQQKRFLKEYQEFDKSLGA
IKTYNEFSDIDLEKDYGLNTSFIEDTRATYEVVKEQVREATGGNDGDGQDADDQFDPEYE
LENTGRQEINYAYIVQLIQAYIPSDTEIGTQRTEAEVKEIDDYIKNLSENNKALADIMQN
LWFEIKFDPEKFRNKQVNELLQGMIDDAREDLIKNFANDNGLNIDDLKFVIRHYDPNEDR
QQTGINTLLSFSVFKNFRQLHPDTELNMLQWKKNVREGLKKFYEDEISPLDEQE
NT seq 3045 nt   +upstreamnt  +downstreamnt
gtggaacaagaagcagtaattgaagaaaaattaattaatcaacttacacgtaaagattca
aagtggacacttcgtgaagatttaaaaaacgaagatgatctttgggataacctctttaaa
attttgtcacgaagtaataaggatgttctgaaggatgtcccactgactgataatgaaaaa
gcagtaatcaagtcaaaaattattcagccaactttttacaaagcagcagaatggttagct
ggcgttaatggacagattagactagcaattcaacgagataatactaagttaggtactgca
gactttttagtaattaataataatgatattgctggtggtaactcaacgtatgaagttgtt
catcaaattcaattccataagcgtagagaaattgaccgtaatcgtcgtggggatgttact
cttttaatcaatggcttgccaatgattcatatcgaattgaagaatagggcacattcacct
aaggaagcatttaatcaaatccaaaaatatattgatgagcagatgttcaatgggattttt
tcaacgattcaaatgtttgttgtttctaatggaagctacactcaatatattgcggcaggt
cagcaattaagagaaaagttcttaactacttgggtagataagaataataagccagttcag
aattacttagattttgctagagaagtattgtctattccagcagctcatcatatggtggct
gattacattgtcttagatagcattcaacatagtatcattgtgcttcgtccctatcagatt
cacgctattcaggcaattgaacgtgcttcgttaggaataaaaataatagatggtaaagaa
aaaagagaggaaccatattctggttttgtttggcatactacaggttcaggtaagacgtta
acttcgtataaagttgctcataatttacttaagattccatcaattgaaaaaacggttttc
ttaattgatcgtaatgatcttgatactcagacttcgcaagcctttgaaacttatgctcag
aatgattcaattgaagttgaaagtacggaaaacagttatgtcttagctagaaaactaaca
tcatcagacaagaaagtagttgttactactcgtcaaaagatgcaagctttattcaaacga
atcaagcaagatcaagagcaaaagcgtttatataagaaattaaagaatgtaaaactagct
ttcatcgttgatgaatgtcaccgagcagtttccccagatcagaagaatgaaattgatgct
ttctttgctaaacatcctttgtggtatggttttactggtaccccaatatttgatgaaaat
gctagagaagctaaggggaggaatgctcgtactacggaacagcagtacggtaaatgctta
cataaatatacaattaaagatgccattagagataaggctgtcttgggcttccaagttgaa
gaagaaggaagtaattctgtcaatacggatgaatctgatatagatgcaagaaagaaggaa
tatttatctctttctcatatgaaagctgtggtcaagcgagttatcgaaaactcttatcgt
aagctaggtatctacaacaagaacagtcgtggttactcctatgatgcaatttttacaact
agttctattaagcaagctcagaagtattaccgtatttttagggatgtgattaatggaact
gatccagatattcagattccttcatatattaaaaaggtgttacctgattttcctaaagta
gcgattacttattcagttggtgaaaatggcgatggagatgaagctaatcaaaaagaaatg
aaacgatccattgaagattataataatatgtttgatacacattattcaatggaggaatta
gctgcttacaatactaatgtcaatgatcgtcttgctcgcaaaaaagctgaatttaagccg
agagtacaacaattagatattgtgatcgtagttgatcgtttactaaccggctttgatgca
ccatgtttgtccactttatttattgatcgaccaccgatgtcatacaaggacttgattcaa
gcattctctagaactaatcgaattttcgataaggataaaaaatatggtcaagtagtgacg
tatcagtatcctaagaaatttgaagctgatatcaatgctgccatagcgctttacacagaa
ggcggaagtagtgagattctagctccaacttgggatgaatcaattattaaatttaaaaag
gctgaaaaacaaattattaaatatgataatcatcaaggtataccaattgcggaggcacca
ttagagcaacaaaagcgctttttgaaagaatatcaagaatttgataaaagcttaggtgca
attaagacttataacgagtttagtgatattgatcttgaaaaagattatggcttgaacact
tcgtttatcgaagacacgcgtgctacctatgaagtagtgaaagagcaagttagggaagca
actggtggtaatgatggagatggacaggatgcagatgatcaatttgatccagaatatgaa
ttagaaaatactggaagacaggaaattaattacgcttatattgttcaattgattcaggct
tatattccttcagatactgagataggaactcagagaactgaagctgaagttaaagaaatt
gatgactatatcaagaatctaagtgaaaataataaagcattggctgatatcatgcaaaat
ctttggtttgaaattaagtttgatcctgaaaaatttagaaacaaacaggtcaatgagctt
ctacaagggatgattgatgatgcaagggaggacttaattaagaactttgctaatgataat
ggattaaatattgatgacttaaagtttgtaattcgtcattatgatccgaatgaagataga
cagcaaacagggattaatactttgctatcatttagtgtgtttaagaacttccggcagttg
catccagatactgagctgaatatgttgcaatggaaaaagaacgttcgtgaagggctcaaa
aagttttatgaagatgagatttctcctttagatgagcaagaatag

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