Lactobacillus kefiranofaciens subsp. kefiranofaciens: WANG_0821
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Entry
WANG_0821 CDS
T01526
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lke
Lactobacillus kefiranofaciens subsp. kefiranofaciens
Pathway
lke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WANG_0821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lke03400
]
WANG_0821
Enzymes [BR:
lke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WANG_0821
DNA repair and recombination proteins [BR:
lke03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WANG_0821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
Viral_helicase1
UvrD_C
AAA_22
RsgA_GTPase
AAA
AAA_29
UvrD-helicase
NTPase_1
nSTAND3
AAA_23
AAA_12
T2SSE
SLFN-g3_helicase
Virulence_fact
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AEG40516
LinkDB
All DBs
Position
complement(899267..901642)
Genome browser
AA seq
791 aa
AA seq
DB search
MVEFTGKVNGIVFENDQDLYKILDVEIIGSLENYSRDEIKVTGSFGDIQILSSYHFEGRL
VMHEKFGLQFRATSYKQILPHEEGSLTKYLSSSNFPGIGKKAATTIIDELGLDALDILKE
NPAKIDTLSISKKQKDSLLSGLNAMDSYSEVVLKLAQYGVNKRVAEHVYQLYHGESIAKL
EKDPYAAVNEIAGFAFKTADTIGKQLEIKQDDPRRIKGAIYQVLLDALTGAGDTYVGLAE
LLTDASKLLDITQFDPIANCINDLQEAGKVVVDGNHAALQNIFQTELDIARAMKNLVASR
KLQEDEQYNDSQVEQAIQDAEKELKINYDDTQKLAIKNALTHPISILTGGPGTGKTTIIN
GILLVLRKLANIPASALYSEDPPFLLAAPTGRAAKRMGEITGISAKTIHRLLGLGIGETR
AEDLNELNGEILIIDEMSMVDMFLFKQLLFSINQTRHIVFVGDKDQLPSVGAGNVFSDLI
KSHAFPTTILKQIHRQGDDSTIITLAHDVNEGKNEQALFKKTKNYSFISCRPDLVGDAVG
QIVKLALKRGFNEDDIQVLGAMYHGNGGVNNLNDIIQEILNPPKAKSKQLEMHSEIFRIG
DRILQLQNNPEKDIYNGQIGKILSIDEDRSKECMVADFDVREVTFDRKDLGDLTRAYAIT
IHKSQGSEFPLVILNLTMQNFVMLKRNLLYTAITRAEKNLVLVGDPRAFVAAFKTPGNDR
KTGLAQKICQQLDMKLERDNSPKPVETTEKEEKTVVEQEPMEKQTEDYILTPDKIYSGAI
DPMIGMENIKL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggttgaattcaccggtaaagttaatggtatagtttttgaaaacgatcaggatttatat
aaaattttagatgttgaaattattggctcacttgaaaattattcacgtgatgaaatcaaa
gtaactggtagttttggcgatattcaaatcctttctagctaccactttgaaggtagatta
gtcatgcatgaaaagtttggcttgcagttcagagcaactagctacaagcaaattttaccg
catgaggaggggtctttaactaagtacttaagttcaagcaactttccaggcattggtaaa
aaagccgcaacaacaattattgatgaacttggcttagatgcattagacattttaaaagaa
aatcctgcaaagattgataccttatcaattagcaaaaaacaaaaagacagcttgctatca
ggtttaaatgcgatggactcttattctgaggttgttctaaaattagctcaatatggggta
aataagcgagtagcagagcatgtttatcaactttatcatggtgaaagtattgctaaatta
gaaaaagatccttatgccgcagtcaatgaaattgcgggttttgcgtttaagactgctgat
acgattggtaaacagctagaaattaagcaggatgatcctcgtcgaattaaaggtgcaatt
tatcaagtattgcttgatgctttaactggcgcaggagatacttatgttggtttagctgaa
cttttgactgatgccagcaagttgttagatatcacgcagtttgatccaattgctaattgt
attaatgacttacaagaggctggcaaggtagtagttgatggcaatcatgccgcattgcaa
aatatttttcaaacagagctggatattgcgcgtgctatgaagaatttagttgcaagtcgt
aagttgcaggaagatgaacaatacaatgattctcaagtcgagcaagcaattcaagatgct
gaaaaagagctaaagattaactatgatgatacccaaaaattggctattaagaacgcacta
acgcatcctatttccatcttgacaggtggacctggtacggggaaaaccaccattattaat
ggaattctgcttgtgttaaggaaattggctaatatccctgcttctgcgttatatagcgaa
gatcctccatttttgctagctgctccaactggtagggcggctaagagaatgggtgagata
actggtattagtgccaagaccattcatcgcttgttgggtttaggtattggtgaaactaga
gcagaagatctgaatgagttaaacggtgagattttaattatcgatgagatgtcgatggtt
gatatgtttttgtttaagcaacttttatttagtatcaaccaaacaagacacattgttttt
gtcggagataaagatcaattgccttccgttggcgctgggaatgtctttagtgacttgatt
aagtcacatgcatttcctaccacgattttaaagcaaattcatcgacaaggggatgattca
actatcatcacattggcccatgatgtcaatgaaggcaaaaatgagcaggctctttttaag
aaaacgaaaaattattcatttattagttgccgaccagatttagttggggatgcggttggt
caaatagttaaattagcactaaaacgtggttttaatgaagacgatattcaagtattaggc
gcaatgtaccatggtaatggtggcgttaataatttaaatgatattattcaggaaattttg
aatccgcctaaagctaaaagcaagcaattagaaatgcatagtgaaattttccgcattgga
gacaggattctgcagctccagaataatccagagaaagatatttataatggtcagatcggt
aaaattcttagtattgacgaagatagatctaaagaatgcatggtagcagattttgatgta
cgcgaagttacttttgatcgcaaagatttgggggatctgacgcgagcttatgcaattact
attcataagtctcaaggatcagagtttcctctagtaattttaaatctaacaatgcagaat
ttcgttatgctcaaacgtaatttgttatatactgcgataactcgtgctgaaaaaaatctg
gtacttgtgggtgatccgcgagcatttgtagccgcctttaagacgcccggtaatgatcgt
aagacaggcttagcgcaaaagatctgtcagcaattagacatgaaattagagcgagataac
agtcctaagccagtagaaacaactgaaaaagaagaaaagactgtcgttgaacaagaacca
atggaaaaacagacagaggattatatactaactccagataaaatttattcaggagcaatt
gatccgatgatcggtatggaaaatattaaattatag
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