Lactobacillus kefiranofaciens subsp. kefiranofaciens: WANG_1629
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Entry
WANG_1629 CDS
T01526
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lke
Lactobacillus kefiranofaciens subsp. kefiranofaciens
Pathway
lke03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WANG_1629 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lke03400
]
WANG_1629 (xthA)
Enzymes [BR:
lke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
WANG_1629 (xthA)
DNA repair and recombination proteins [BR:
lke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
WANG_1629 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEG41324
LinkDB
All DBs
Position
1810906..1811733
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AA seq
275 aa
AA seq
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MILISWNIDSLNAALTGTSARAEETRQVLDKIHEADPDIIAIQETKLRATGPTKKHKEIL
AEKFPEYDYVWRSSVEPARKGYAGTMYLYKKQLHPAATEPQIGAPEPMDSEGRIITLDFG
KFFVTQVYTPNSGSGLKRLAERQVWDSKYIEYLQKLDKQKPVLASGDYNCAHTEIDLKHP
ENNHHSAGFTDEERTDFTKLLNSGFTDTFREVHGNVKGVYSWWAQRVRTAKANNSGWRID
YWLVSSRIAKQVVRSEMIDTGKRADHCPILLEINL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgattttaatttcatggaatattgattcattaaatgcggctttaactggaacttcagct
agagcagaggagacgcgtcaggttttggataaaattcatgaggctgatcccgatattatt
gcaattcaagagaccaaattacgagcaactggtccaaccaaaaagcacaaagagattctg
gcggagaaattccccgaatatgactatgtttggcgctcttcagtagagccggcacgtaag
ggctatgctggcaccatgtatctatataaaaagcagctgcatcctgctgccacagaaccg
caaattggtgctcctgagccgatggattcagagggacggataattaccttagactttggt
aaattctttgtcacgcaagtatatacgcctaattcaggctctggcttgaagcgtctagct
gagcgtcaagtctgggacagcaagtatattgaatatttacaaaaattagataagcaaaag
ccagttttggcaagtggcgactataattgtgctcataccgaaattgacttgaagcatcct
gaaaataatcaccattctgctggttttactgatgaagaaagaaccgattttactaaattg
ttaaatagtggctttaccgatactttccgagaagttcacggcaatgttaagggcgtttat
tcttggtgggcacagcgcgtgagaaccgctaaggctaataactcaggctggagaatcgat
tattggctagtaagcagccgcattgccaagcaggtagttcgctccgaaatgatcgataca
ggcaagcgtgcagatcattgcccaattttactagaaattaacctttaa
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