Lactobacillus kefiranofaciens subsp. kefiranofaciens: WANG_p1197
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Entry
WANG_p1197 CDS
T01526
Name
(GenBank) Bacterial nucleoid DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
lke
Lactobacillus kefiranofaciens subsp. kefiranofaciens
Brite
KEGG Orthology (KO) [BR:
lke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lke03032
]
WANG_p1197
03036 Chromosome and associated proteins [BR:
lke03036
]
WANG_p1197
03400 DNA repair and recombination proteins [BR:
lke03400
]
WANG_p1197
DNA replication proteins [BR:
lke03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
WANG_p1197
Chromosome and associated proteins [BR:
lke03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
WANG_p1197
DNA repair and recombination proteins [BR:
lke03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
WANG_p1197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AEG41800
LinkDB
All DBs
Position
pWW1:192671..192949
Genome browser
AA seq
92 aa
AA seq
DB search
MASKSDLIKAVAKKADLTHKDAGLAIDAVLDTIRETLADDKKVQLIGFGTFEVRQRAARK
GRNPQTGKTIKIPATKVPAFKPGKVLKDAVKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaaagtgatttaattaaagcagttgctaagaaggctgacttaacacataaa
gatgccggattagctattgatgcagtgcttgacactattcgagagacactagctgatgat
aagaaagtgcaacttattggttttggtacttttgaagtacgtcaacgtgctgcacgtaag
gggcgtaatcctcaaactggtaaaactatcaaaattccagctactaaagtaccagctttt
aagcctggcaaagtattaaaagatgctgttaagaagtaa
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