Lentilactobacillus kefiri: DNL43_00845
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Entry
DNL43_00845 CDS
T06710
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lkf
Lentilactobacillus kefiri
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lkf03009
]
DNL43_00845
Enzymes [BR:
lkf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DNL43_00845
Ribosome biogenesis [BR:
lkf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DNL43_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_25
Cons_hypoth95
MTS
PrmA
Methyltransf_11
RrnaAD
N6_N4_Mtase
TRM
Methyltransf_4
Methyltransf_23
PCMT
Methyltransf_12
DOT1
CMAS
Methyltransf_32
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QGV23946
LinkDB
All DBs
Position
complement(166661..168031)
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AA seq
456 aa
AA seq
DB search
MKKSVPVEKNQNYDVDISDLTYQGLGVAKIDDFPIFIENALPTENVTMKVIKVKKNFAFG
RVVKINKKSKDRVELVDKAYTQTGIAPLQHLKYDAQLKFKQHQIEVDFSKMKLDVKVDPT
IGMDDPTHYRNKAQIPVRMINGKLQTGFYRKHSHDLVPIEDFYIQDPKIDEAIVVVRDIL
RKFRVQPYDEESNKGVVRNIMVRRGHYSHEMMIVLITRTEKLPSSGEIIAEITKSLPEVK
SIVQNVNPQKTNALMGKKNKVLAGKSTIEDTLLGLKFNISASSFYQVNPVQTEKLYDLAT
KKADLSADDVVIDAYCGIGTISLSMARIAKQVYGVEIVPEAVEDAKKNAKLNDLTNVHFV
AAKAEDQMAKWQEDGLKPDVISVDPPRKGLDASLIDSVVKMQPKRVVYVSCNPATLVRDV
KLFSDQGYEVNQPIQPVDQFPQTVHVESITVLERQK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcagtaccagtagaaaaaaaccagaattatgacgttgatattagcgatttg
acctatcaaggcttgggagttgccaagattgatgatttcccaatctttattgagaatgcc
cttcccactgaaaatgtgacaatgaaggtcatcaaggttaagaagaactttgcttttggc
cgagttgtcaaaatcaacaagaagagcaaggaccgggttgagttggtggataaagcctat
actcaaactggaattgcccctctgcagcatttgaaatacgatgctcagctgaagtttaag
caacatcaaattgaagttgacttcagtaaaatgaagttggatgttaaagtggatccgaca
atcgggatggatgatccaactcattaccgtaacaaggctcaaattccagtgagaatgatt
aacggcaagctccaaacaggattttaccgcaaacattctcatgatttggtaccaattgag
gacttctatattcaagatcctaagattgatgaagcaattgtcgttgttcgtgatatcctt
cgtaaattccgagttcaaccatatgatgaagaatctaacaagggtgttgttcgaaacatc
atggtgcgtcgtggccattattctcacgagatgatgattgttttaattacccggactgaa
aaattaccaagcagtggtgaaattatcgccgagattacgaagtcgttgccggaagtaaag
agtattgttcaaaacgttaatccgcaaaagacaaatgctctgatgggcaagaagaacaag
gtgttggccggaaagagtaccattgaagataccctgttaggcttgaagtttaatatttct
gcaagctcgttttatcaggtcaatcccgttcagactgagaagctctatgatttggcaact
aagaaggctgatttatcagctgacgacgttgtgatcgatgcttattgtgggattggaacg
atttctctttcaatggctcgcattgccaaacaggtttatggggttgaaattgttcccgaa
gctgttgaagatgctaaaaagaacgctaagctgaatgatttaaccaatgttcattttgtt
gccgcaaaggctgaggatcagatggctaaatggcaggaagatggcttaaagcctgatgtc
atttctgttgatccaccacgtaagggccttgacgccagcttgattgacagtgtggttaag
atgcagcctaagcgcgtggtttacgtttcatgcaaccccgcaacgttggtacgagatgtc
aaattgttctctgaccaaggctatgaggttaatcaaccaattcagccggtcgatcaattc
ccgcaaactgtgcacgttgaatcaattaccgttttggaacgtcaaaagtaa
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