Lentilactobacillus kefiri: DNL43_00880
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Entry
DNL43_00880 CDS
T06710
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lkf
Lentilactobacillus kefiri
Pathway
lkf03420
Nucleotide excision repair
lkf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DNL43_00880 (pcrA)
03430 Mismatch repair
DNL43_00880 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkf03400
]
DNL43_00880 (pcrA)
Enzymes [BR:
lkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DNL43_00880 (pcrA)
DNA repair and recombination proteins [BR:
lkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DNL43_00880 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DNL43_00880 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QGV23953
LinkDB
All DBs
Position
complement(175606..177840)
Genome browser
AA seq
744 aa
AA seq
DB search
MAEESLLAGLNKDQKDAVVHTEGPVLIMAGAGSGKTRVLTHRIAYIIEHNHIMPWRILAI
TFTNKAAREMRERVSKLLGEGGNDVWVSTFHALCVRILRRHIDLLGYNKAFTIADTSEQR
TLVKRVLRDLNIDPKKFDPRSVLSSISNAKNDLLTPKQFKVQAISAFDQIVADVYERYQA
ELKQNESLDFDDLIMMTIQLFDEHKDVLADYQDKFQYIHVDEYQDTNEAQYQLVNTLAKK
NQNICVVGDADQSIYGWRGANMQNILDFKKDYPAAHVTLLEQNYRSTKTILNAANAVIEH
NDNRADKNLWTENAKGDQISYYRGQTENDEARYVVAKIQEEMAKPKRNYGSFAILYRTNA
QSRVIEETLLKSNIPYTMVGGHKFYDRKEIRDALSYLTLLANPNDSMSFERVINEPKRGI
GQTSIERLRLFANDHGWSLLEAAKNVDLANQISTRAKNSISDFEHTMSEISAKMDEMSIT
EITEEVLDKSGYLSTLKASKSLEAQTRLENLEEFISVTQKYDEDNEGETGQQNLVNFLSD
LALVSDQDSLEEDNAQVTLMTLHAAKGLEFPVVFLMGMEEGLFPLSRAAADESELQEERR
LAYVGITRAKEKLYITNAYSRMLYGRRQNNPESRFVNEIIPELIHSDNQQQTDTPLTTPF
DRRTRRATATTYHRPAQVKESPKGTGADKKAWSVGDKVSHKAWGTGTVVKVAGTGEDMEL
DIAFKQEGIKRLLAAFAPIKKQEN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaagaaagtttattagcaggtttgaacaaagatcaaaaagatgctgttgttcat
accgaaggaccggttttgattatggcaggagccggtagtggaaaaacaagggttttaacc
catcgaattgcctacataattgaacataatcacattatgccttggcggattttagcaatt
actttcaccaacaaggcagctcgagagatgcgtgaacgggtatccaagctgttgggtgaa
ggtggcaatgacgtctgggtttcaacgtttcatgcactgtgtgttcgaattttacgtcga
cacattgacttactgggctataacaaagcatttacgattgccgataccagtgagcagcgg
acgttggtcaaaagagttctccgagatctgaacattgatcccaagaaatttgatccacgc
tccgtactttcaagcatttcaaacgccaaaaacgatttattgactcccaaacaattcaaa
gtacaggcaattagtgcatttgatcagatcgtagcagacgtgtatgaacgttatcaggca
gaactcaagcaaaacgaatcacttgattttgatgacctgattatgatgacgattcagttg
tttgatgaacataaagatgttttagctgactatcaggataagttccagtacattcacgtt
gatgaatatcaggataccaacgaagctcagtatcaactggttaatacattggctaaaaag
aatcaaaatatttgtgttgttggtgatgccgaccagagtatttatggttggcgtggtgcc
aacatgcaaaacatccttgattttaagaaggattatccggctgcacatgttaccttgctg
gaacaaaattaccgttctaccaagacaatcctgaacgcggcaaacgcggttattgagcat
aatgacaaccgggcggataaaaatttatggactgaaaatgcgaaaggcgatcagatttcc
tattatcgtggccaaactgaaaatgatgaggcccggtatgtggttgccaaaattcaagaa
gaaatggctaagccaaaacgaaattatggcagctttgcgatcctgtatcgaaccaacgca
cagtcacgagtgattgaagagactctgctcaaatcaaacattccttataccatggttggt
gggcacaaattttatgatcgaaaagaaattcgggatgccttatcatatctcacactttta
gctaatcccaatgattcaatgagtttcgaacgggttattaatgaacccaaacggggaatt
ggccagaccagtattgaacggttaagactatttgccaatgatcatggctggagtttattg
gaagcagccaagaatgtggatttggccaatcaaatttccacccgggcaaaaaattcaatc
tcagattttgaacacacaatgagtgagatttctgccaaaatggatgaaatgtcgattacc
gaaattactgaagaagttttggataaaagtggttatttaagtactttgaaagcctccaag
tcccttgaagcccaaaccaggcttgaaaacttggaagaattcatttctgttacccaaaag
tatgatgaggataacgaaggcgaaaccggccagcaaaacctggttaatttcttaagtgat
ttggccttggtttctgaccaggatagtcttgaagaagataatgcccaggttactttgatg
actcttcatgctgctaaaggtttggaattcccagttgtctttttgatggggatggaagag
ggattgttcccactttcaagagctgctgcagatgaatcagaattacaagaagaacgtcga
ctggcatatgtgggaattacccgtgccaaggaaaaattgtatattaccaatgcctattcc
agaatgctttatggtcgccgccagaataatcccgaatcacgatttgttaatgaaatcatt
ccggaattaattcacagcgacaatcaacagcagactgatactccgcttaccacgccgttt
gaccgccgaacacgacgggcaacagccacaacttatcaccgtcctgctcaagtgaaagaa
tcacctaagggaacgggggccgacaaaaaggcctggtccgttggtgacaaagtttcccat
aaggcttggggaaccgggacagttgttaaggtagccggaaccggcgaagatatggaactt
gatatcgcctttaaacaagaaggtattaagcggttgcttgcggcgtttgcgccaattaaa
aagcaggaaaattaa
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