Lentilactobacillus kefiri: DNL43_00920
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Entry
DNL43_00920 CDS
T06710
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lkf
Lentilactobacillus kefiri
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lkf03016
]
DNL43_00920
Enzymes [BR:
lkf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DNL43_00920
Transfer RNA biogenesis [BR:
lkf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DNL43_00920
Prokaryotic type
DNL43_00920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
EcoRII-N
Motif
Other DBs
NCBI-ProteinID:
QGV23961
LinkDB
All DBs
Position
complement(182612..183409)
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AA seq
265 aa
AA seq
DB search
MIRYKVTLAYDGTLFSGFERQPDRRTIEGVLTQKVNIMAKNPDPAIVVYGSGRTDAGVHA
LGQVVHFDFPFDLPTKAIYRGLNSLLPLDMEIKKAEKVSDTFHARYDVSGKRYVYRLDLG
EFKDPFKRNYTGNWRFPIDIERVQTAMKDFIGEHDFSSFVASGSTARSNIRTIYEATAYL
DKEANEIRLEFYGNGFLYNMVRIMVGVVVEIGSQMRPEHDILRLYDVKDRDQARRTMPAS
GLYLKKVYYEGEDPQHPTKIPKHQR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgattcgatataaagtgacattggcatacgacggcacactcttcagtggctttgaacgc
caaccggaccgacgaaccattgaaggcgtcttaacccaaaaggtcaatattatggccaaa
aacccggatccagccatcgttgtatatggatcagggcggactgatgccggtgttcacgca
ttagggcaggtggttcattttgattttccgtttgacctcccgaccaaagccatatatcgt
ggccttaacagtcttttgccgttagatatggaaatcaaaaaggccgaaaaggtttcggac
acatttcatgcccggtatgacgtgtctggcaagcgatatgtatacagattggatttaggt
gaatttaaggatccgtttaagcggaattacaccgggaactggcgttttccaattgacatt
gaaagagtccagacggcgatgaaggattttatcggcgaacacgatttcagtagttttgtt
gcatcgggttcaactgctcggtcaaacattcggacgatctatgaagccaccgcttatttg
gataaagaagccaatgaaattcgattggagttctatggcaatggcttcctctataacatg
gttcgaatcatggtgggggtagttgttgagattggatcccagatgcgccctgagcacgat
atattgcgtctgtacgacgttaaggatcgtgaccaggctcggcggacgatgccggcttcc
ggtttatacctgaaaaaagtctattatgagggtgaagatccgcaacatccaacaaaaata
ccaaaacatcaacgataa
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