Lentilactobacillus kefiri: DNL43_01350
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Entry
DNL43_01350 CDS
T06710
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lkf
Lentilactobacillus kefiri
Pathway
lkf03410
Base excision repair
lkf03430
Mismatch repair
lkf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DNL43_01350 (recJ)
03430 Mismatch repair
DNL43_01350 (recJ)
03440 Homologous recombination
DNL43_01350 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkf03400
]
DNL43_01350 (recJ)
DNA repair and recombination proteins [BR:
lkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DNL43_01350 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DNL43_01350 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DNL43_01350 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF3122
Motif
Other DBs
NCBI-ProteinID:
QGV24018
LinkDB
All DBs
Position
complement(242253..244583)
Genome browser
AA seq
776 aa
AA seq
DB search
MINSKFKWQLDQPANQDVVDKLSKDANIDPFVAKLLVQRDITTAEGAESFMNPSVSSFHD
PFLMHDMKKGIDRIRQAVEKGEHITVYGDYDADGITSTTIMYETLSDLGADVDYYIPNRF
TEGYGPNVKAFQSIVNNGTSLIVTVDNGVAGFDAIAAANALHCDVVVTDHHSLPEKLPDA
YAIIHPRVKDDEGKAYPFGDLCGAGVAFKIAQALMDEVPSDLIDIASIGTVADVVSLTDE
NRAIVKFGVQAIQNSQRPGLLALIKEAGINLAQFSEEDIGFGIAPRLNSLGRIKDATVGV
ELLSTFDEDRASELAKFANQQNDLRKSLVDQFFTDAVQKVEENGDISKRHTLVVVGNNWH
QGVLGIVASRLVDKYQRPTIVMTGSDDSDEVKGSGRSVDSFDLFKAIDPIRDQTVGFGGH
HSAVGLTIKQDKVDVLKDQLEKAAEEQHLDLSVKPQLEISGALPVLKVTPDLCDKIKTLA
PFGQDNPKPIFKFQFDHLANVKTMGKTNDHLKFSMVQGDSQLTAIAFGKGDVASDIQNGQ
SQLQVVGEIGENTWNNRTTLQVMIDDLKETPQPVVDERTRELHKQMFTDSGIYVFFHEKV
LKQLRRYVNDQSQVVMYNQIEQEAVKDQQLYIVDCPDVVDDLVQVLSKVSPKTTVLYLYK
KQLISKIGMPDRHSYAKLFRFIKEHSNINIATQLKQISEHLHISARTIIFMVQVFLELDF
ITIQDRIINLNPNYAARDLKTAPSYHLRTEQLAAEKKLLVSNTHELVSFVKDCLGV
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgatcaattccaagtttaaatggcaacttgaccaaccagccaaccaggatgtagttgat
aaattgtcaaaggatgcaaatattgacccgtttgttgccaaattattggtacagcgggat
attacaactgcagaaggtgcggagagtttcatgaatccttctgtcagctcatttcacgac
ccgtttttgatgcatgacatgaaaaaggggatcgaccggattcgacaggctgttgaaaaa
ggcgagcacatcaccgtttacggtgactatgatgccgatggtattaccagtacgacgatt
atgtatgagacgttgagtgatcttggagccgatgttgactactatattcccaaccgattt
acggagggctacggtcccaatgtgaaggcgtttcaaagtattgtgaataatgggacctcg
ctaattgtcacggttgataatggcgtggccggatttgacgcgattgccgcggccaatgca
ttgcactgtgatgtggtcgttactgaccaccattcattgccggagaagcttcccgatgcg
tatgccatcatccatcccagagttaaagatgatgaaggtaaggcgtatccatttggtgat
ctttgtggtgccggggttgcatttaaaattgcccaggcattaatggacgaagtgccgtct
gatttaattgatatcgcttcaattgggacggttgccgacgttgtttcattaaccgacgaa
aatcgggcaattgttaaatttggtgttcaagccattcaaaatagtcagcggcctggtttg
ctggctttaatcaaagaagccggtattaatttggctcaatttagcgaagaagatatcggt
tttggcattgcaccgcgtttgaattcacttggcagaatcaaagatgcaacggtcggagtt
gaactcttatctacttttgatgaggatcgggcttccgaattggccaaatttgccaatcag
caaaatgatttgcgcaagtcgcttgtcgatcaatttttcactgacgctgttcaaaaggtt
gaggaaaatggggacatcagcaagcgtcatacgttggtcgtcgttggcaacaattggcat
caaggtgttttgggaattgttgccagccgattggttgataaatatcagcgaccgacaatt
gtgatgactggttccgacgatagtgatgaagtcaaaggttctggccggagtgtcgacagt
tttgatttattcaaagcaattgatccgattcgtgaccaaacggttggctttggtggccac
cactctgctgttggactcaccatcaaacaagacaaggtcgacgtgcttaaagatcaactt
gaaaaggcggctgaagagcagcatttggatttatccgtcaaaccacaattggaaatttca
ggagcgttgcctgtattgaaggttaccccggatctgtgtgataaaattaagacactggcg
ccttttggccaggataatcccaagccaatctttaaatttcagtttgatcatcttgccaat
gtgaagacaatggggaagacaaatgatcatttgaagttctccatggtgcaaggtgacagc
caactgacggcgattgcttttggtaaaggagacgtcgcttctgacattcaaaacggtcag
tctcaattgcaggttgtcggtgagattggtgaaaatacatggaataatcgaacaactctt
caagtcatgattgatgatttgaaagaaacgcctcaaccagttgttgacgaacgaacccgt
gaactgcacaaacaaatgtttactgattcggggatctacgttttcttccacgaaaaagtt
ttgaaacagttgcgacgttatgtgaatgatcagtcgcaggttgtgatgtacaaccaaatt
gagcaggaagccgttaaagatcaacaattatatattgttgactgccctgatgtcgttgat
gatctggtccaagttttgtcgaaggtatcaccgaagaccactgtcctttatttgtacaaa
aagcaacttatatccaaaatagggatgccagatcgtcattcttatgctaaactatttagg
ttcattaaagaacactcaaacatcaatattgcgacgcagttaaaacaaatttcagagcat
ctccacatttccgcacggacaattatttttatggttcaggttttccttgaattggatttc
atcacgatccaggacagaattatcaatctgaatccaaattacgctgcccgtgatctgaaa
acagcaccaagttatcatcttcggactgaacaactggctgctgaaaagaaactgctggtt
tcaaatactcatgaattagtcagcttcgtcaaggactgtttgggcgtttga
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