Lentilactobacillus kefiri: DNL43_01610
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Entry
DNL43_01610 CDS
T06710
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lkf
Lentilactobacillus kefiri
Pathway
lkf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DNL43_01610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkf03400
]
DNL43_01610
Enzymes [BR:
lkf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DNL43_01610
DNA repair and recombination proteins [BR:
lkf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DNL43_01610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
SLFN-g3_helicase
AAA_22
UvrD-helicase
HHH_5
nSTAND3
AAA_28
AAA_12
RsgA_GTPase
AAA_16
PIF1
NTPase_1
AAA
HHH
RecR_HhH
T2SSE
NPHP3_N
AAA_29
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QGV24067
LinkDB
All DBs
Position
complement(298501..300975)
Genome browser
AA seq
824 aa
AA seq
DB search
MDRSMDLFGSEQNNHEPQYVDGRLKAIFFSSNDSFYKVVLVEITDTDVDWPEDEIVVTGN
FGDLVEENSYHFTGKLVDHPRYGKQFQASNYTSVIATTREGVVKYLSGEQFPGIGKKTAE
RVVDVLGDDAIEKITADGRVLDNVPISSKLRTAIVENLNTDDNLEKVIVGLNSYGFSSAI
ASSIYQKYHEDALKIIAENPYQLVEDIDGISFKKADAIALRLGIVPDSNERIRAGLMYAI
DELCLQNGDTYTTTGPLIETAINVLEGNSNQQIPGKKLAESLVELAKEGKVVGEENRIYL
TRLYNAEVQIADHLNRVIKNKDDEDQLKEDAIKKQLRVVEKQFDINYDDSQVAAIVQAIQ
SPAFILTGGPGTGKTTIINGIVNTYARLHEYSLDINSYKDKPFPIVLAAPTGRAAKHMTE
STGLPASTIHRLLGLNGRESNDTAGTKDIEGALLIIDEMSMVDTYLFRSLVRAIPNHMQV
VLVGDQDQLPSVGPGQVFHDLLVSKQIPAMQLNTIYRQEKGSSIIQLAHDIHRGKLSADF
TENQSDRSFIPCNEYQISSVIQQVTKRAKQKDFGLMDVQVLAPMYRGRAGIDRLNDVVQD
VWQGDAAGKKSVTIREHTYRIGDKVLQLVNNPERNVFNGDIGIIVGMETVKDQKTPNKIT
IDFDETEVTYEKNEWTQFTLAYCTSIHKAQGSEFKMVILPIVRQFSRMLQRNLLYTAVTR
ASDFLIMLGEKEAFEQCVRNVSVNRQTSLVKRLVDAIGLKVSDDGSEEDSTQEPETAGLS
AVESADHAEKQALPDHLTNDVINQNLIDPMIGMDDVSPKDFMKS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
ttggatcgttcaatggatttatttggctcagaacagaataatcatgaaccacaatatgtt
gatggccgattaaaggcgatcttcttttcgagtaacgacagtttttataaagtggtcctg
gtggaaattaccgataccgacgttgattggcccgaagatgaaattgtcgtgaccggtaat
tttggtgatctggtcgaagaaaacagctatcatttcactggcaaattggttgaccacccg
cgttatgggaagcagtttcaagccagcaactacaccagtgtgattgccaccaccagggag
ggggtcgtcaaatacctgtctggtgagcaattccccgggattggtaagaagaccgccgaa
cgagtggttgacgtgttgggcgacgacgcgatcgaaaagatcactgctgatggccgggtc
cttgacaatgtgccaatcagttccaaattacggacggcaatcgttgagaatttgaatacc
gatgataatttggaaaaagtcattgtcggcttaaacagctatggattttccagcgcgatt
gcctcgtcaatttatcaaaaatatcatgaagatgcattgaaaattattgccgaaaatcct
taccagttagttgaggatatcgatggcatcagctttaaaaaggccgatgccatcgccctt
cgactgggaattgtccccgattcaaatgaacgaatccgcgccggactgatgtacgcaatt
gatgaactctgtcttcaaaatggtgatacatatacaaccaccgggccactgattgaaacg
gccatcaacgttttggaaggcaattccaaccaacagattcccggcaaaaaactagcagaa
agcttggttgaacttgccaaagaaggcaaagttgtcggcgaagaaaatcgaatttattta
acccgtttatataatgccgaagtccagattgccgatcatttaaatcgggtaattaaaaat
aaggatgatgaagatcagctcaaagaagatgctatcaaaaagcagcttcgggtggttgaa
aagcaatttgatattaattacgacgattctcaagttgccgcaattgtccaggcaatccaa
tcaccggcgtttattttgactggtggacccggtaccggaaagacgaccatcattaatggg
atcgtgaatacctacgcgcgactgcacgagtattcattggatattaattcgtataaggat
aagccgtttccaattgttttggctgcgccaacaggccgggcggccaaacacatgacggaa
tcaaccggcttacctgccagcacgattcacagacttttgggcctcaatggccgcgagtcc
aatgacactgccggcaccaaggatattgaaggagccttgttgattattgatgaaatgtcg
atggtcgatacctacttgttcagatcattggttcgggcaattcccaatcatatgcaggtt
gtcttagtaggtgatcaggatcagttgccatcagttggacccggacaggtttttcacgat
ttactggtatcaaaacaaattcccgccatgcagctgaacaccatttaccgtcaggaaaaa
ggatcttcgattattcaattggcgcatgatattcatcgtggcaagctgtcggctgatttt
accgagaaccaatctgaccgatcctttattccctgtaacgaatatcagatctcgtcggtg
atccaacaggttaccaaacgggccaaacaaaaggattttggcttaatggatgtccaggta
ttggccccgatgtatcgtggccgggcaggaattgaccgcttgaatgacgtcgttcaggat
gtttggcagggggacgctgccggcaagaaatccgtcaccatccgcgaacacacttatcgg
attggtgataaagtgcttcagctggttaataatccggaacgaaacgtttttaacggtgat
atcgggattatcgttgggatggaaaccgttaaggaccagaagaccccgaacaaaattaca
attgattttgatgaaactgaagtcacgtatgaaaagaacgaatggacgcagtttacatta
gcgtactgtacttcgattcataaggctcagggtagtgaatttaaaatggttattttaccg
attgtccgccaattttcacggatgctgcagcgaaatctgctttacacagctgtgacccgg
gcaagcgatttcctgatcatgttgggcgaaaaagaagcttttgaacaatgtgtccgcaac
gtttcggttaatcggcagacaagtctggttaaacgtctggttgatgccattggcttaaag
gttagtgatgacggcagtgaggaagattcgacccaagaacccgaaaccgccggtctttct
gccgtggaaagtgccgatcatgctgagaaacaagccctgcccgatcatttaacgaatgat
gttattaatcaaaatctaattgatccgatgatcggaatggatgacgtaagtcctaaagac
ttcatgaagtcttag
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