Lentilactobacillus kefiri: DNL43_03960
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Entry
DNL43_03960 CDS
T06710
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lkf
Lentilactobacillus kefiri
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkf03400
]
DNL43_03960
Enzymes [BR:
lkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DNL43_03960
DNA repair and recombination proteins [BR:
lkf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DNL43_03960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
RecC_C
Arena_nucleocap
Motif
Other DBs
NCBI-ProteinID:
QGV24463
LinkDB
All DBs
Position
complement(769696..773256)
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AA seq
1186 aa
AA seq
DB search
MTLQFVLGKNGLDHQEKMVEILQKQKLNHPNDQFFYLVPNHIKFESEVSILKQLSDPNDI
TTAQSDVQVLSFTRLAWFFLRNTPEYQKQRISTAGINMLLYQIIVDNEDKLILFDHEIHN
PGFIGQIASQITEMQAGNVLPEDLLEMLENSDSTITNDLRDKLHDFAIIYSQYVKQISDN
YFDNHTVLNLLSEKLADIDLSGYHFYIAEFSKFTAQECGLVQTLINQAASVTVSLTLDRP
YPTELPQQPNLFFQSSKLFNQLYRFAADNQVPYLKAVMADQPRISPDMQKLEQYWMTSSS
LGTSKGDNQISPKSVQIYQADNLYSELDQVATMIHQMVASGKYRYSDFLILTRHLDAYQN
ILDPVLTTQQIPYFKDIQKSMADHPLVELLSSLFDIYDPNRARNYRYDDVMRFLKSELVL
PMIDGKPMSIDAYRQALALTDNLVLKNAYADSRWTQKEDWQYVWLPDNDEGQTATKITDQ
DRDISRQINIIRHLVRDLLPKFYKKFYKAKTNREASGILYQFLADAGVIDRLKSWRDDAT
DAGDMNRSTQVEQVWRTFCSLLDECVQILGDKPFVPEDFWSLIYAGFQGADYSQIPSTLD
QVSISESGMVQMADHKVTFMIGSNDDNMPDRLVNHNLFGDDDINQLQSNLGDDQYLNDPA
DVQMAFEPYLNYLAFMTASEKLIFTYTNKLNDETAVKLSPYVSRIQRYFNLQIVNNPAIP
DVEHQVLPYVGTKLGTLHHLIQVAQNTYKDNLNLSPDWAGILRYLTNDSEVGRKTANLLK
SIHYKNVPKKLDDQIITGLYGSELNISISQLETFYKNPYEYFLKYGLKLQERPKFELSTA
STGTFYHDAMDHIVKEIHAQSIDLAALSDKDVEELVNENVQKLIEDPQNFDYVVLTSSNR
MHYISMQLQATIQQMVRTLRDQQTLTPMRPKNTELIFGQPNQKQALKGLQFELPNDRSVK
VRGRIDRIDSMTTKDKRYFGIVDYKSSDRKFDFNAAYDGTSMQLLTYLDVLKNNLQQLNS
DDKDVALAGALYLHIYNAVFKPDELNGKSFDQALLKKHEYNGILVQDDDLLGDLEDGLKS
GFSQIYPFRKTAKGFTGAKSLIDPLKLDAFLEHTEKLIVSAASKIFDGDDKLWPFKQGQV
TGMQFTPYKSIMNFDPILPENQYRPVDNDSVKDILKKLGEDQSDGI
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
gtgacactacaatttgtcttgggtaaaaatggacttgatcatcaagaaaaaatggtcgag
atcctccaaaaacaaaagttaaatcatcctaacgaccaatttttttatttagttccaaat
catattaaatttgaatcagaagtcagtattttaaaacaactgagtgatccaaacgacata
acgactgcccaaagtgacgtgcaggtattgtcgttcacccgattggcatggttctttttg
agaaacacgccggaatatcaaaagcagcggatcagtaccgccgggatcaacatgttactg
tatcaaattattgttgataatgaagataaattaatcttatttgatcacgaaatccacaac
cctggatttatcggccagattgcttcgcaaattaccgaaatgcaggccggaaatgttctt
ccggaagatttacttgagatgctggagaattcagacagcaccattaccaacgatttgcgc
gataagctccatgattttgccattatttactcgcaatacgtcaagcaaatttcagataat
tactttgataatcacacggttctcaacctactgagtgaaaaattggcggacattgacttg
tccggctaccacttctacattgccgaattttcaaaatttaccgctcaagaatgtggttta
gttcaaacactcatcaatcaggccgcctcagtgacggtttctttgacgttggatcggccg
tatccaaccgaactacctcaacagcccaacctgttcttccaatcttccaagctctttaac
cagttgtaccggtttgcagcggacaatcaggttccctacttaaaggcagttatggctgac
caaccgagaatcagccccgatatgcaaaaattggagcagtactggatgacgtccagcagt
ctggggacgtctaaaggtgataaccaaatttcacccaagtcagttcagatttatcaagct
gacaatctctattctgagttagaccaagttgcgacgatgattcatcaaatggtcgcaagc
gggaaataccgctactccgattttttgattttgacacggcacctggatgcctatcaaaat
attttagatccggtattaacgactcaacagattccgtacttcaaagatattcaaaagtcc
atggccgatcatccattggtcgaactgttaagttcattgttcgatatttatgatcccaat
cgagcacgcaattatcgctacgatgatgtgatgcgtttcttaaagtccgaacttgtcctg
ccaatgattgacggcaagccaatgtcaattgacgcttatcgtcaagcactggctttaacg
gataacctggtattgaagaatgcatatgccgacagccgttggactcaaaaagaagattgg
caatatgtctggcttccggataacgatgaaggacagacagcaactaagattaccgatcag
gatcgtgacatttcccgacaaattaacattatccgtcatctggtgagggatttactgcca
aaattttataagaagttctataaagccaagaccaaccgtgaagcatccggtattctctac
caatttttggcggatgcaggcgtcattgaccggctcaaaagttggcgtgacgatgccact
gatgccggtgacatgaatcgttccacccaagttgaacaggtttggcggacattttgttct
ctattggatgaatgtgttcaaattttaggggacaagccctttgttccagaggatttctgg
tccttgatctatgccggattccaaggtgccgattattctcaaattccttcaactttggat
caggtcagcatttctgaaagtggaatggttcaaatggccgatcacaaggtgacgttcatg
attgggtcaaacgatgataatatgcccgatcggctggttaaccataacttgtttggtgac
gatgatatcaatcagctgcagagtaatcttggcgatgatcaatacttaaatgacccggcg
gatgttcaaatggcttttgaaccttatttgaactatttggccttcatgacggcatccgaa
aaattaatttttacctacacaaataaattaaatgatgaaacagccgtgaaactttcacca
tatgtttcacggattcaacggtactttaatctacaaattgttaacaatccggccattccc
gatgtggaacaccaggtgctgccatacgtcggcaccaagctggggactctgcatcacctg
attcaggttgcccaaaatacttataaagacaacctcaatttaagcccggattgggcaggt
atcctgcgctatttaaccaatgattcagaggttggcaggaaaaccgccaatcttttaaag
agtatccactataaaaatgtgccaaagaaattggatgaccagatcattactggtttgtat
ggctccgagttgaatatctcaatttctcaacttgaaaccttctataagaatccctacgaa
tacttcttgaaatatggcttgaagcttcaggaacgaccgaagtttgaactttcaacggct
tcaaccggaactttctaccacgatgcgatggatcacattgttaaggaaattcacgcgcag
tctattgatttggcagcattgtcagataaggatgttgaagaactggttaatgaaaacgtt
cagaagctgattgaagatcctcaaaactttgattatgttgtgttgaccagttccaatcgg
atgcactacatttccatgcagctgcaggcgacgattcaacagatggttcggacactacgc
gatcagcagacgttaacgccaatgcggccgaaaaatactgagctgatatttggccagccc
aatcaaaaacaggcccttaaaggattgcagttcgagttgcccaatgatcgttcagttaaa
gttcggggtcgaattgaccgaattgattcaatgaccaccaaagacaaacggtattttgga
attgtcgattacaagtcatctgaccggaaatttgatttcaatgcggcctacgatggaact
tcaatgcagttactgacatatttggacgtgttgaaaaacaatctccaacagcttaattcc
gatgataaggatgtggcgcttgccggcgcactttatctgcatatctataatgcggtgttc
aagcccgacgagctcaatggcaaatcgtttgatcaagcattgttgaagaagcatgagtat
aacgggattctggtacaggatgatgatttgcttggtgatttggaagatgggttaaagagc
ggcttttcgcagatttatccattccgaaagactgccaaaggtttcacgggtgccaagtcg
ctgattgatccattgaaattggatgcatttcttgagcacactgaaaagctgattgtcagc
gctgcttcaaagattttcgacggggacgataagctgtggccgtttaagcagggccaggtg
acagggatgcaatttaccccgtacaaatcaatcatgaattttgatccaatcttaccggag
aatcagtaccggccggtggataacgattcagttaaagatattttgaaaaagttaggggag
gaccaatccgatggcatttaa
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