Lentilactobacillus kefiri: DNL43_07270
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Entry
DNL43_07270 CDS
T06710
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lkf
Lentilactobacillus kefiri
Pathway
lkf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DNL43_07270
09124 Replication and repair
03420 Nucleotide excision repair
DNL43_07270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkf03021
]
DNL43_07270
03036 Chromosome and associated proteins [BR:
lkf03036
]
DNL43_07270
03400 DNA repair and recombination proteins [BR:
lkf03400
]
DNL43_07270
Enzymes [BR:
lkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DNL43_07270
Transcription machinery [BR:
lkf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DNL43_07270
Chromosome and associated proteins [BR:
lkf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DNL43_07270
DNA repair and recombination proteins [BR:
lkf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DNL43_07270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
PDDEXK_1
DEAD
ResIII
HBB
PhoH
FliJ
Motif
Other DBs
NCBI-ProteinID:
QGV25077
LinkDB
All DBs
Position
complement(1524731..1527091)
Genome browser
AA seq
786 aa
AA seq
DB search
MAVHQVGIRELVEFLLRTGDLSPVISSENTAQEGSRIHRKIQHSRPASYQSEVALKTSIQ
YMDDEYVISGRADGIDERDGKPLIEEIKTSDLEFNSLPDSTLQLYWGQVKVYSYIVMHQA
DIKSVDLQLTYVQTPDEKITTKTQTFTKTESELFFTALVTEFEQWIKLRHDLDERRIRSA
KALKFPFPDYRPGQHKLATNVYKTILLEKHLFVEAPTGTGKTISTLFPAIKSMGEQLISR
IFYFTAKQSTRHVAENTISIMAKQGLTLKSITLTAKDKIAFPAEKDVPPEKNPYMVGYYD
RVRTAIKDIIQNEDQITKKTIQTYAEKHKVDPFEFSLDVSLFCDVIICDYNYLFDPQVHL
QRFFSFPDPTNCFLVDEVHNLVQRSREMYSATLESSPINPLLEQLVKHKAANQKVIKRLE
SLKRSFKRYSKPAAETVDKQIAQLAPLDNFNNTLENLIETIHQWLATQTPSDTVDAVVDY
YLQCRRYYLISTFYDETYRTRIIIGDHTIIFRQFCMDPSKQLKASLNLGGAAILFSATLS
PISYYQQVLGNEEDSLCMVSHSSFPQENCQVVIANNINTLYANRENSLKPICETIFTMIS
QKAGHYMMFFPSMAYLNATLSKFVELHPDIDVINQKPEMDNDARTAFLDEFRNDDKQTKV
GFALLGGIFSEGIDLKNEQLIGVGIISVGLPGMNKESDLIREYFDSLNGQGFSFAYQLPG
FNNVSQAAGRVIRTDTDKGIIVLMDQRFNQTRYRQIFPQNWANIKVTNNADQLKNTLQNF
WQNGNR
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggccgtacatcaagtcggcattagagaattagtggagtttctgctgcgcaccggtgac
cttagccccgtcatcagcagtgaaaacaccgctcaggaaggcagccggattcaccgaaag
attcaacacagccgcccggcttcataccaatccgaagtcgctttaaagacttcgattcag
tacatggacgatgaatatgtcatcagcggccgagctgacggaatcgacgaacgtgacggc
aagccgctgattgaagaaattaaaacatccgacctggaattcaactccctgcccgactca
acgcttcagctctattggggtcaggtcaaagtctattcgtacatcgtcatgcaccaggca
gacatcaagtcggttgatctgcagctgacttatgtccagactcctgacgaaaaaataacg
actaagacgcaaaccttcactaaaactgaatccgaattgtttttcaccgctctggtaacc
gagtttgaacagtggatcaagctgcgccatgacttggacgaacggcgaattcgttcagca
aaagccctaaaattcccgttcccggattatcgtcccggccaacacaagcttgccaccaac
gtttacaagacgatcctgttggaaaagcatctctttgtggaagcgccgactggaaccggg
aaaaccatttcaacgctctttccagcgatcaaatcaatgggtgaacagttgattagccgg
attttttattttacagccaagcaaagcacccgccacgttgccgagaacacgatctcaatc
atggccaaacaggggctgaccctcaaaagtattacgctaaccgccaaggataagattgcc
ttcccggctgaaaaagatgtcccacctgagaagaatccctacatggtcggctattatgac
cgggttcgaactgcgattaaagacattattcaaaatgaagatcagattaccaagaaaacc
attcaaacatacgctgaaaaacacaaggttgacccctttgaattctcactggacgtcagc
ttgttttgcgatgtcatcatttgtgattacaactatttattcgacccacaggttcattta
cagcgcttcttctcatttcccgatcccaccaactgtttcttggttgatgaagtccacaat
ctggtccagcgttcacgggaaatgtattcggcaaccctggaatcatctcctatcaaccca
ttgttggaacagctggttaaacacaaagctgccaatcagaaggtcattaaacgcctcgaa
tcgttaaaacggtcatttaaacgctacagtaagccggccgcagagacagttgataaacag
attgcccagctggcaccattggacaactttaacaacactcttgagaacctgattgaaacc
attcaccaatggctggccacccaaacgcccagtgacacagtggatgcggtcgtcgattat
tatctgcagtgccggcgctattatctgatcagtacgttttacgacgaaacttaccggacc
cggatcattattggcgatcacacaattattttccggcagttctgcatggatcccagtaaa
cagctcaaggccagcttaaatttgggtggggcagcaatcctcttttcagctaccctgagc
ccaatatcgtattaccaacaggttttgggcaacgaagaagacagcctctgcatggtatct
cattcatcatttccgcaggaaaactgtcaggttgtcattgccaataacatcaataccctg
tacgccaaccgcgaaaacagtctcaagccgatttgtgagaccatctttaccatgatcagc
caaaaggccggccactacatgatgttctttccatcaatggcttatttaaacgccacgcta
agcaagtttgtggaacttcatccagacattgacgtgattaatcaaaagccggaaatggat
aacgatgcccgaaccgcgtttcttgacgaatttcgcaatgacgataaacagacaaaggtt
ggtttcgcactgctcggaggcattttctctgaaggaattgatttaaaaaacgaacaatta
attggtgttggaattatcagcgtcggccttccgggcatgaataaggaatccgatctcatc
cgagaatattttgattcattaaatggccagggcttctcgtttgcctaccaactccccggt
ttcaacaacgtcagtcaggcagctggacgagtcattcgaaccgataccgacaaaggcatc
atcgttttaatggatcagcgatttaatcaaacccgataccgccagatttttcctcaaaat
tgggcaaatattaaagtgaccaataacgccgatcaacttaaaaataccctgcagaatttt
tggcaaaatgggaatcggtag
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