Lentilactobacillus kefiri: DNL43_07590
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Entry
DNL43_07590 CDS
T06710
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lkf
Lentilactobacillus kefiri
Pathway
lkf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DNL43_07590 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkf03019
]
DNL43_07590 (recQ)
03400 DNA repair and recombination proteins [BR:
lkf03400
]
DNL43_07590 (recQ)
Enzymes [BR:
lkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DNL43_07590 (recQ)
Messenger RNA biogenesis [BR:
lkf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DNL43_07590 (recQ)
DNA repair and recombination proteins [BR:
lkf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DNL43_07590 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QGV25136
LinkDB
All DBs
Position
1595626..1597401
Genome browser
AA seq
591 aa
AA seq
DB search
MTPQELLKTKFGYDSFRPGQQAVIDDIMAHKNVLTIMPTGGGKSLCYQIPAMLEDGLTLV
VSPLIALMKDQVDGLNETGIPATFINSSLDFDEMDERFAQARNGEVKLLYVSPERLDSGA
FSRLASLPIDLVAVDEAHCISQWGHDFRPSYLALTERLHQLPTKPTIVALTATATPQVAD
DIKQRLDIQDEVKTGFERDNLAFKVVKGQDSDKYILDYLKLNSGESGIIYASTRKKVERL
TKLLKKHKFSVAKYHGGMTKDQRRKSQDDFLYDRALVMVATNAFGMGIDKSNVRFVIHDA
VPGSLEEYYQEAGRAGRDGLPSEAILLFKLKDVQTQHFFIDQSERDDESKQRAYKKLQIM
TQYANTQQCLQQFILEYFGDEGPTCGRCSNCLDTRESQDITVDTQKVLSCVLRMKERFGK
SLVAQVLTGSKVQKVKQLRFNELSTYGIMKGMHQKDVVGLIDYLTATGYLAASGGQFPIL
RVTTLGADVLQGKEKVSRKISIKATKALSENDDLFESLRQLRRELAEKQGVPPFVIFSDK
TLHEMSAVMPTTDSQMLDVKGVGESKLAKYGEQFLDAISNYQDNQKAEVKA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacgccccaagaacttctaaaaactaaatttggatacgacagctttcgcccgggacag
caggctgttattgacgacatcatggcccataagaatgtgttgaccattatgccgaccggt
ggtggtaaatcactttgttatcaaattccggcaatgctagaagatggcttgacactggtt
gtttcgccattgattgcattgatgaaggatcaggtggacggtttaaatgaaactggtatc
ccggcaacctttatcaacagcagtctggattttgacgaaatggatgaacggtttgcccaa
gctcgcaacggggaagtcaaactgttatacgtttcccctgaacgactggattccggtgcc
ttttcaagacttgccagcctgccgattgatttggtagccgttgacgaagcgcattgtatt
tctcagtggggccacgattttcggccaagctatttggctttgaccgaacgactgcatcaa
ctaccgaccaagccaacaattgtggcgttgacagcgaccgctacgccacaggtggccgat
gatatcaagcagcggctggacattcaagatgaggttaaaaccggttttgaacgtgacaac
ttggcatttaaggttgttaagggtcaggacagcgacaaatacattttggactacttgaag
ctgaactccggtgagtccggcattatctatgccagcactcgcaagaaagttgagcgattg
accaaattactcaagaaacataaattttccgttgccaagtatcatggcgggatgaccaaa
gaccagcgccgtaaaagtcaggatgactttctgtatgatcgggccttggttatggttgcc
accaatgcctttggaatggggattgataagagcaacgtgcgctttgtgattcatgacgcc
gttcccggcagcttggaagaatattatcaggaagccggtcgtgccggccgggatggtctt
cccagcgaagcaatcttattatttaaattaaaagatgttcaaactcagcatttcttcatt
gatcagtctgaacgagacgatgaaagcaagcagcgggcatacaaaaagctccagattatg
acgcagtatgcgaatacccagcagtgtctgcagcagtttattcttgaatattttggtgac
gagggaccaacttgtggtcgctgcagtaattgccttgataccagagaatcgcaggacatt
accgtggatacacaaaaggttttgtcttgtgttttgaggatgaaagaacgatttggcaag
agcctggttgctcaggttctgaccggatccaaggttcaaaaggtgaagcagcttcgattt
aatgaactttcaacgtatgggattatgaaagggatgcatcaaaaagatgttgtcggcttg
attgattatttgactgccactggttatttagctgccagcggtggccaattcccaatcctc
agagtgacgactttgggagccgatgttttacagggaaaggaaaaggtttcccggaagatt
tccattaaggctaccaaggcattgtcagaaaatgatgacttatttgaaagccttcgtcag
ttaagacgagaattggctgaaaagcagggcgttccaccattcgtcattttctcagataag
acactccatgagatgagcgctgtgatgccaaccactgattctcaaatgttggatgtgaag
ggtgtcggtgaaagcaagctcgccaagtacggtgaacagttcctggacgctatttcaaat
tatcaagataatcaaaaagcagaagtcaaagcataa
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