Lentilactobacillus kefiri: DNL43_09635
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Entry
DNL43_09635 CDS
T06710
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lkf
Lentilactobacillus kefiri
Pathway
lkf03030
DNA replication
lkf03430
Mismatch repair
lkf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DNL43_09635
03430 Mismatch repair
DNL43_09635
03440 Homologous recombination
DNL43_09635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lkf03032
]
DNL43_09635
03400 DNA repair and recombination proteins [BR:
lkf03400
]
DNL43_09635
Enzymes [BR:
lkf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DNL43_09635
DNA replication proteins [BR:
lkf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DNL43_09635
DNA repair and recombination proteins [BR:
lkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DNL43_09635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QGV25518
LinkDB
All DBs
Position
2004445..2007792
Genome browser
AA seq
1115 aa
AA seq
DB search
MSYVPLQVISSYSLLQSPIRISELISEAKDRGYKALALTDLNVMYGAVEFYDACSNAGIK
PLIGLTLQLPGLILSDHHYNLVMLAKNQQGYANLVKLSTLKMTLPELAVSQLKKYLNNLV
VILPPLAEMNALLLQGRSDDAAALIEQLKSLGIDKGALKIGVDYHSSDSLIDMLGKLAAD
EQVPLVADSPVDYIDATDYFPMQVLKNIAAGTKIANVAELSKQVGPYWLRPADQVEAEYR
QIHLTDSITQVDNIVAACNVEIKKQQPKLPQFDTPNGIDSGTYLRQLCEKGLADRLTKNK
IKDSTPYKHRLDRELSVIHSMGFDNYFLIVWDVINFAHQTNIITGPGRGSAAGSLVAYVL
TITDVDPIKYNLLFERFLNPERVQMPDIDLDIPDDKRDEVIQYVHQKYGHKRVAQIITFG
TLAAKQSIRDVGRVFGLNTTQQDQWSKAIPSAFHVTLQDAYDNSQRLKNLVADGPLNQAL
YETARSLEGLPRHYSTHAAGLVLSDNPLVDLVPLQNGNEGLLMTQYSKDYVESVGLLKMD
FLGLRNLSILADALHQVKLTTGKDLDISAVPLDDEKTIQLFAEGNTTGIFQFESNGIRSV
LRRLHPERFEDVALVNALYRPGPMQNIDEVVKRKNHNEALTYPDDSLVEILKPTYGVIVY
QEQVMLVASKMAGFSLGQADILRRAMSKKKLGVMEQMKVLFMDGSKKRGHSEQVANKVFD
YIERFANYGFNKSHAVAYTKMAYELAFLKVYYPGEFHVALLNSVNNNSVKVKEYLLDAKS
MGVKVVGSNINQSEADFTFQNGEIIFGLDSIKGVRHDMVIDLLAERKKNGPFKSFPDFLS
RLADKYRKVELINALIYSGALDVFPFNRSELIAAAPEFISSVELSGNSMSLFKALEPKMP
RMPEMPLMDRLEKENEYLGAYLSGHPTERFVPLAKRLKAQTTNTMAEGMKNVYLILYVTK
VKIIRTKTGKQMAFLDGNDQVGETSITVFPNLFAKTQSWLHKDLVILVKGNVEKNNTIQM
VANEMEPAANALQNLKRTSETRKWYLRIDGNHDKNAMFHKLDDLSHEFHGQVPVIVFEME
TKKSWQLDPDLWLNQSDTLKDRLITIFGRNNVVYK
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
gtgagttacgttccattacaagtcatcagttcctatagtttactgcaaagcccaattcga
atttcggaactaatttccgaggcaaaggatcgaggatacaaggccctggcgttgacggac
ctcaacgttatgtacggcgctgttgaattctacgatgcttgttcgaatgcgggtattaag
ccgttgattggattgaccttacagctgcccggactgattttaagcgatcatcattataat
ttagtgatgctggccaaaaatcagcaggggtatgccaatcttgtgaagttatcaacgttg
aaaatgacgcttccggagctggctgtttcccagttgaaaaaatatttaaacaatctggtt
gtgattttaccgccgcttgccgaaatgaacgcccttttactgcagggccgttccgatgat
gcagcagcactgattgagcaactcaaatccctgggcattgacaaaggtgctttaaaaatt
ggggttgattaccattcctctgacagtctgatcgacatgcttggcaagctggcggccgat
gagcaggtccctttagtagccgattcaccagtcgactacatcgatgcgaccgattatttt
ccaatgcaggtcttgaaaaacattgccgcgggaacaaagattgccaacgttgcggaatta
agcaaacaagtgggtccatattggctgcgaccggcagatcaggtagaagccgagtaccgc
caaattcatttaactgattcgattacccaagttgataacattgtcgctgcatgtaacgtt
gaaattaaaaaacaacagcccaagctgcctcaatttgatacgccaaacgggattgattcg
ggtacctatcttcgtcaactttgtgaaaaggggttggctgatcgcttaaccaagaataaa
attaaggattcaacgccttataagcatcgtctggatcgggagctgtcggttattcactca
atgggctttgacaattatttcctaattgtgtgggacgttatcaatttcgcccaccagacc
aatatcattactggtcctggacggggatcggctgccggatcgctggttgcctacgtttta
acgattactgacgttgatccgattaaatataatttattgtttgaacgtttcttgaatccg
gaacgggttcaaatgccggatattgatttggatattccggatgataaacgtgatgaagtg
atccagtatgtccaccaaaaatatggtcataagcgggtggcccagattatcacatttgga
actttggccgccaagcaatcaattcgggatgtcggccgggtatttggcttgaacacgact
caacaggatcaatggagtaaagcgattcccagtgcatttcacgtgacgctgcaggatgcc
tacgataattctcagcgattgaaaaatttggttgccgatggtcctttgaatcaagcgctg
tacgaaactgctcgaagcttggaaggtctaccgagacattattcaactcacgctgctgga
ctggtgttgagtgataatccactggttgacttggttccactgcaaaatggtaatgaaggc
ctgctgatgacccagtattccaaggactatgttgaatcagtcggtttgttgaaaatggat
tttcttggattacgaaacctgtcgattcttgcggatgccctgcatcaagtgaaactgacg
acaggtaaagatttggatatctcagctgtgcccttggatgatgagaaaaccattcagctg
tttgcggaagggaacacaactggtattttccagtttgaatcaaacgggattcgaagcgtt
ttacgccgactgcatccggaaagatttgaagatgtggcccttgtaaatgccctgtatcgt
cccggtccaatgcaaaatatcgatgaagtggttaaacgcaaaaatcacaatgaagcattg
acgtatcccgacgatagtttggtggaaattcttaagccgacttatggcgtcatcgtttat
caagagcaggtgatgctggtagcctcaaagatggccggcttttcacttggacaagccgat
attttacggcgggcgatgagtaagaagaagcttggcgtcatggagcagatgaaagttctg
tttatggacggttccaaaaagcgcggccattccgagcaggttgccaacaaagtttttgac
tatatcgaacgattcgccaattatggttttaacaaatcccatgccgttgcatataccaag
atggcttacgaactggcctttttgaaagtatattatcccggcgaatttcacgttgccctg
ctcaattctgttaataataattcagttaaggtcaaagagtatttattggacgccaagtcc
atgggggtcaaagtggttggctcaaatatcaatcaaagtgaagcggactttacctttcaa
aatggcgaaattatttttggccttgattcgattaagggtgttcgccatgatatggtcatt
gacctgcttgccgaaagaaagaaaaacgggcccttcaaatcatttcccgactttttaagt
cggctggcagataaatatcgaaaagttgaactcattaacgcgttaatttattccggcgcg
ctggatgtctttccgtttaaccgttctgaattaattgcggccgcaccggaatttatcagt
tccgttgagttgagtggtaattcgatgagtttgtttaaggcactggaacccaagatgccg
cgaatgccggaaatgccgttgatggatcggctggaaaaagaaaacgaatatcttggtgcc
tatttatccggtcatccaacggaacggtttgtgcccctggctaaacgccttaaggcccaa
acaaccaatacgatggcagaagggatgaaaaatgtttacctgattctttacgtcaccaag
gtgaagattatcaggactaaaaccggtaaacagatggcatttttagacggaaatgatcaa
gtgggggagacctcaatcaccgtcttccctaatttgtttgccaaaacccagtcctggctt
cacaaggatttggttatcctcgtgaagggcaacgttgagaaaaataatacgattcaaatg
gttgccaatgagatggagccggctgccaatgccctacaaaatctcaagcggacatctgaa
acccgaaaatggtacctgagaattgacggtaaccatgataaaaacgcaatgtttcacaaa
cttgatgatttaagtcacgaatttcacggccaggtaccagtgattgtatttgaaatggaa
actaaaaaatcctggcagctggatccggatttatggctgaatcaaagtgatacgcttaaa
gaccgtttaatcacaatttttgggcgaaataatgtggtttataagtaa
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