Lentilactobacillus kefiri: DNL43_10605
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Entry
DNL43_10605 CDS
T06710
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lkf
Lentilactobacillus kefiri
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkf03019
]
DNL43_10605
Messenger RNA biogenesis [BR:
lkf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DNL43_10605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QGV25704
LinkDB
All DBs
Position
complement(2197390..2198376)
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AA seq
328 aa
AA seq
DB search
MAKQLMDIQLDEDFEMYVLLKDSTKRVAKNGKTFLSLVFQDKSGEISGKYWDASKEDVAR
FTSGKVVLLKGKRENYMNSPQIKILAMRLANNSEPHDPVNFVKRAGMSRDQMEEYIDQTI
FEITNATYNRIVRSLLSKHADAFYTFPAAKSNHHDFAGGLAFHTISILRQAHAIVSQYDG
INAPLLYAGAILHDLGKTIELSGPVATEYTLAGNLLGHISIMDAEISETADKLGIDPESQ
DLLLLRHMILSHHGLLEYGSPEQPKILEAEILHHLDELDATIVMIQGATKNIEPGQFSDR
VFGLDNRRFYKPKKSVDPKQKPTQGKLL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaactcatggatattcagttggatgaggactttgagatgtatgttctctta
aaagattcaacgaaacgagtcgcaaaaaacggcaaaacatttttgtcactggtatttcaa
gataaatcgggagaaatatctggtaagtattgggatgcttccaaggaagatgtggcacga
ttcacttccggaaaagttgttttattaaagggaaaacgagagaattacatgaactcccca
caaattaaaattcttgcgatgcggttggctaacaacagcgagccgcatgacccggtcaat
tttgttaagcgggcaggcatgtctcgggatcaaatggaagagtacattgatcaaacaatt
tttgaaatcaccaatgcaacctataaccggattgttcggtcattgctttcaaagcatgcc
gatgcattttacacatttccggctgctaaatcgaaccaccatgattttgccggtggcttg
gcatttcatacgatttcgattttacgtcaggcacatgcaatcgtgagtcagtatgatggt
ataaatgcgcctttattatacgcaggtgccattttacatgatcttggtaaaacgatagag
ttgtccggcccagtggccacagagtacacattagcgggtaatctgcttggacacatcagt
attatggatgctgaaattagtgagactgctgataaattgggaattgacccagaatcacaa
gatttattgctcttaagacatatgattctttcacaccatggattgctggaatatggatct
ccggaacagccgaagattcttgaagcagaaatccttcatcatcttgacgagcttgatgcg
acgattgtgatgatccaaggtgctactaagaatattgaaccgggacaattcagtgatcga
gtgttcggattggataatcggcgcttttataagcctaaaaagtcggttgatcccaaacaa
aaaccgacccagggcaagcttttatga
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