Lentilactobacillus kefiri: DNL43_11035
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Entry
DNL43_11035 CDS
T06710
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lkf
Lentilactobacillus kefiri
Pathway
lkf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DNL43_11035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkf03400
]
DNL43_11035
Enzymes [BR:
lkf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DNL43_11035
DNA repair and recombination proteins [BR:
lkf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DNL43_11035
Prokaryotic type
DNL43_11035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QGV25779
LinkDB
All DBs
Position
complement(2282059..2282751)
Genome browser
AA seq
230 aa
AA seq
DB search
MKPFIKNDWWDVLKPEFEKTYYQQLRQFLISEYKTQYIHPDMNHIFEAFQLTPFSKVKVV
ILGQDPYHEPHQAQGLSFSVMPGVQIPPSLQNIYKELQSDLGIKPVAHGDLESWAKQGVL
LLNSVLTVRNGQAFSHKGKGWEQLTDAAIQKLSAREKPVVFILWGRAARNKISLIDTKTN
VVIQSAHPSPLSAHRGFFGSKPFSKTNEALAAMGEEPINWQLPEKVSQTS
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtttataaaaaatgactggtgggatgttttaaaacccgaatttgaaaaaact
tactatcagcagctgcgtcaatttttaatatcagaatataaaactcaatacattcatcct
gatatgaatcatatttttgaagcgtttcagctgacgcctttcagcaaggtgaaagttgtg
attttgggtcaggatccatatcacgaacctcaccaagctcaggggttaagcttttcagtg
atgccgggcgttcagattccaccgtcactacagaacatttataaggagcttcagtctgac
ctcggtattaagccggttgctcacggtgacttggaaagctgggcaaagcagggcgtcctg
cttttgaattcagtgctgaccgttagaaatggtcaggctttctcccacaagggaaaaggc
tgggaacagttaacggatgccgcaattcaaaaactttctgctcgtgaaaaaccggtcgtc
tttattctgtggggaagagctgccagaaataagatttcattaatcgataccaaaaccaat
gtggtgattcagtccgcacatccaagcccattgtctgcgcatcgtggattctttggctca
aagccattttccaagactaacgaagcgttggcagcaatgggtgaagaaccgattaattgg
cagttaccagaaaaggtatcgcaaacatcttag
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