Lentilactobacillus kefiri: DNL43_11140
Help
Entry
DNL43_11140 CDS
T06710
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lkf
Lentilactobacillus kefiri
Pathway
lkf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DNL43_11140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkf03400
]
DNL43_11140
DNA repair and recombination proteins [BR:
lkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DNL43_11140
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DNL43_11140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_16
AAA_29
nSTAND3
AAA_33
nSTAND1
DnaJ_CXXCXGXG
AAA_21
AAA_23
APS_kinase
AAA_14
AAA_22
NACHT
SLFN-g3_helicase
AAA_18
Viral_helicase1
RNA_helicase
cobW
Mtrc-MtrF_II-IV_dom
ATPase
DUF4350
AAA_24
Septin
NB-ARC
MeaB
MMR_HSR1
NTPase_1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QGV25983
LinkDB
All DBs
Position
complement(2303333..2306203)
Genome browser
AA seq
956 aa
AA seq
DB search
MNKIVIRGARAHNLKNINVTIPKNKLVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLSSY
ARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYFRLLWARVGVPIC
PNDGSVISSQSVDQMIDQVMKLPERTKMQILSPIIRGKKGQHKKIFEKIKREGFVRVQVD
DETYDIDEVPELDKNKSHDINIIIDRIIVKDGINNRLSDSLEAALRLSGGYAVADFLGKR
DPMIFSEHYACPICGFTVGELEPRLFSFNSPLGACPDCDGLGMKLEVDEDLVVPDRTKTL
AAGALAPWNSASSKWYPNMLKQVCDAEGIDMDVPFNKLPRSQQKFVLYGSKTKSFHFVLQ
SDFGGIRDVDGPFEGVINNVDRRYHNTSSDFTRDNLSQYMTELTCQTCHGYRLNRKALAV
KVGKEDIAQISALDVTAELNFFKSLTFGDQDTMIAKPIIKEITDRLTFLRNVGLDYLTLS
RSARTLSGGEAQRIRLATQIGSNLTGVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTL
IVVEHDEDTMRAADYIVDIGPGAGQKGGRVMAVGTPEDIEKVPESITGQYLSGKRFIPVP
DKRRKGNGKKIRLTGASENNLKNLTVDFPLGKMVVVTGVSGSGKSTLVNDILKKALAQKL
NHNSEKPGKYKSISGYKNIEKIVDIDQTPIGRTPRSNPATYTGVFDDIRGLFANTNDAKL
RGFKKGRFSFNVKGGRCETCHGDGILKIEMNFLPDVYVPCEVCHGKRYNAETLEVEYKGK
NIADVLDMTVDEAVDFFSAIPKIARKLQTIKDVGLGYVHLGQPATTLSGGEAQRMKLASE
LHKKANGQNFYILDEPTTGLHSEDIRRLLGVLQKLVDQGNTVLIIEHNLDVVKSADYLID
LGPEGGDGGGNIVATGTPEQLCKVQESYTGQYLKPVLERDKKLTKQAEKRAVKATK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatcgtcatccgtggggcgcgtgcccacaatttaaaaaatattaatgtgact
atcccaaaaaataagctggttgtcatgaccggcctgtcaggatctggaaaaagttcattg
gcatttgatacgctatacgctgaaggccagagaagatacgttgaaagtctgtcttcgtat
gcccgtcaatttttgggacaaatggataagccggacgttgattcaattgacggcttaagt
ccagccatttcaattgatcagaagacaacttccaagaacccccgatcaacagttggaacg
gtgaccgaaattaatgattatttccgtttgctttgggcgagagtcggggttccaatctgt
ccaaacgatggatcggttatttccagtcagtctgttgaccagatgattgatcaggtgatg
aaattgcccgaaagaaccaaaatgcaaattttatctccaattattcgtggtaaaaaaggt
cagcacaagaagatttttgaaaagatcaagcgtgaaggtttcgtccgagtacaagtcgat
gatgaaacctatgacattgacgaagttcctgaactggataaaaataagagccacgatatt
aacattattattgaccggattatcgttaaagacggcattaataaccggctatcggattcg
cttgaggcagccctgaggttaagtggtggatacgccgttgccgacttcttgggtaaacgg
gatccaatgatcttttcagagcactatgcctgtccaatttgtgggtttaccgttggtgaa
ttggagccacgactcttttcatttaattcaccgcttggtgcctgcccggactgtgatggc
ttggggatgaagctggaagttgatgaggatttagtggtccctgatcggaccaagacattg
gcagcgggcgcattagctccttggaactccgctagctccaaatggtatccgaatatgctc
aagcaggtctgcgacgctgaaggaattgatatggacgttcctttcaacaaattaccgcga
tcacagcaaaaatttgttttgtatggttcaaagaccaagtcatttcactttgtccttcaa
agcgactttggtggaatcagggatgttgacggcccatttgaaggggtcatcaacaacgtt
gatcgccgataccacaacaccagcagtgactttacccgcgacaatctcagccaatatatg
actgagcttacttgtcaaacttgtcatggttacaggcttaatcgcaaagctttggctgtt
aaagtcggcaaagaagacatcgctcagatttctgccttggacgtgactgctgaattaaac
ttcttcaagtctttgacttttggcgaccaggatacaatgattgccaagccgatcattaaa
gaaattaccgatcgtttaaccttcttaagaaacgtgggtcttgattatctgacattgtcg
cgttcagctcggacattatccggtggtgaagcccaacgaattcgattggcaactcaaatt
ggttctaatttgactggggttctctatattcttgatgaaccttcaattggccttcatcaa
cgtgataacgatcgattgattgcgtcactcaaaaagatgcgtgacttggggaataccctg
atcgttgttgaacatgacgaagataccatgcgagccgctgattatattgttgatattggt
cctggcgccggtcaaaagggtggccgggtaatggctgttggaacacctgaagacattgaa
aaggtgccagagtcgattaccggccagtatttatctggcaaacgtttcattccagttccg
gataagcgccgaaaaggcaatggcaaaaagattcgcctgactggtgcttcggaaaacaat
ttaaagaatctgaccgttgattttccactcggaaagatggtcgttgtaaccggggtttcc
ggatcaggtaagtcaactttggtcaatgatattttgaaaaaagcattggctcaaaagctg
aatcataattctgaaaagcccggtaagtataaatcaatttccggttataaaaatatcgaa
aagattgttgatattgaccaaaccccaattggcagaacaccacgttccaacccggcgact
tacaccggtgtttttgatgacattcggggtttatttgccaataccaacgacgccaagctt
cggggctttaaaaagggccgtttcagcttcaacgtcaagggtggccgttgcgaaacctgt
catggagacgggatcttgaagattgaaatgaactttcttcctgacgtttatgtcccatgt
gaagtttgccatggcaagcgatacaatgctgaaactttggaagttgagtataaaggtaaa
aatattgctgatgtgctggatatgacggttgatgaggctgttgacttcttcagtgccatc
ccaaagattgcccgcaagctgcaaaccatcaaagatgttggtttaggttacgtccatttg
ggccagcccgcaacaactctctccggtggggaagcgcaacgtatgaagttagcttcagag
cttcataagaaagcaaatggtcagaacttctacattttggatgagccaaccactggactc
catagtgaagatattcgtcgtttattgggcgttcttcaaaagctggttgatcaagggaac
accgttttgatcattgaacacaatttggacgttgttaaaagcgctgattacctgattgat
ttggggcctgaaggtggtgacggtggtggcaacatcgtcgctaccggaacccctgaacag
ctttgcaaagttcaggaaagttacaccggtcaatatttgaagcccgtccttgaacgagat
aagaagttaaccaagcaagctgagaaacgtgcagttaaagcaactaaataa
DBGET
integrated database retrieval system
