Leuconostoc kimchii: LKI_01485
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Entry
LKI_01485 CDS
T01233
Name
(GenBank) DNA-directed DNA polymerase III, alpha chain PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lki
Leuconostoc kimchii
Pathway
lki03030
DNA replication
lki03430
Mismatch repair
lki03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LKI_01485
03430 Mismatch repair
LKI_01485
03440 Homologous recombination
LKI_01485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lki03032
]
LKI_01485
03400 DNA repair and recombination proteins [BR:
lki03400
]
LKI_01485
Enzymes [BR:
lki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LKI_01485
DNA replication proteins [BR:
lki03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LKI_01485
DNA repair and recombination proteins [BR:
lki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LKI_01485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
tRNA_anti-codon
HHH_6
HHH_3
DEDDh_C
RNase_H_2
DUF655
Motif
Other DBs
NCBI-ProteinID:
ADG39840
UniProt:
D5T0P1
LinkDB
All DBs
Position
complement(280709..285022)
Genome browser
AA seq
1437 aa
AA seq
DB search
MALTQQEQLQHLINQIKLPEEIKPFFDTGRLTQVTVSRVAKTWTFEVALNQILPANVFMQ
FSQYLHTSFTNIAQTKIILTTPVHIVDEALVNQYWHMALTNSILNHATVQQLTSNTALKT
ISDNHYGIAVGAESLFVALNDQALASIVGAYQRFGFPKMALTPNQDTALAQQIEDSVAQH
HAKAQEDLQKAIKASEQTKSKSSSEGVALTLGRKIAADSEITRLETIDSEEHRVVVEGYI
FASEIRELRSGRKLMTIKITDYSSAIAAKKFSNNETDEAVFDGLKTGMWVRMSGNIQEDT
YARELVLNIYDLQVIDHDSRQETYTEDVKRIELHVHSTMSTMDAVTNYAAVAQLAKSWGQ
EALAVVDTANVQGFPEAVAAGAKNDLKMIYGMEANLVEDGEPIGFNLTPVELLDKETIYV
AFDLETTGLSAVTDKIIELSAVKMQLGNVIEKFSEYINPGFPLSDFTTKLTSITDTMVAH
ADTEENIITRFRKWIGDAVLIGHNVTFDIGFMNAAYARYNQTVIKNPVIDTLPFTRWLYP
DYKSYRLGTLAKRFNINLEQAHRAIFDAETTGHIAWRLIKEVNTRYELTRHNQLNDYMTD
GDAWKHGRPVHATLLVQNAVGLKNLYKLVSRSNIDFFARVPRIPRSILNQYREGLIIGTG
DTSGDVIMTLIEKGREEALKKAKYYDYIEIQPTANYAPMIESELVANETKLHDILKEMVS
IGETLDKPVVVTGDVKYTNPEDKIYRDILIATQPGNPQNRTALPELYFRTTQALLTDFSF
MGNDVAKKIVIDNTHIVADMLEAITPLKSGSYPPNIPSAGDELTSRTLATAKKWYGDPLP
SVIQSRIDQELQAIIGNGFAPHYMISQRLVEKSNKDGYLVGSRGSVGSSFVATMSGITEV
NPFAPHYRSAHGDYFELADPKIYESGYDLPDKADPNHPGEMLIGDGQNIPFETFMGFKGD
KVPDIDLNFSGDYQPIAHNYMKVLFGEHNVYRAGTIATVAEKTAFGYVKGYERDHEKQYR
GAEVERLAQGVTGVKRTTGQHPGGILIVPREYEVYDFTPVQYPADDQKSLWQTTHMDYHA
IHDNLLKMDILGHDDPTMVRTLKDMSGIDPQSIPANDPGVLSLFTSPKALGVTEDQIFSK
TGTLGLPEFGTSFVRGMLEETQPHTYSELLQISGLSHGTDVWLGNANELIENGTATIGTV
IGTRDKIMTDLINWGFPAADAFNVMEKVRKGKGITDAYQAQLREAKIPEWYIQSMLKIKY
MFPRAHAAAYVLMALRIAYFKVYFPTIYYATYFSVRADQFDIVAMSRGKNATKEAMKKIR
TLGNDATVGDKNLLTVLEMANEALERGITFSMVDLYKSEASEWVIDGETLIPPFSAVPSL
GDNVAKQIIVARQDKPFLSKEDLKKRGKVSQTVIEYLSRNSVLDGMPDENQLSLFDF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacccagcaagaacaattgcaacatttaattaatcagattaaactacctgaa
gaaataaagcctttttttgacacgggtcgcctaacccaagtaactgtgtcaagagtggct
aaaacgtggacattcgaagtagcgctgaatcaaatattaccggccaacgtgtttatgcaa
tttagtcaatatttacatacttcgtttacaaatattgcgcagacaaaaattatcttaaca
acacctgtacacattgttgatgaagcattagttaatcagtattggcacatggcattgaca
aattcaatacttaatcatgcaacggtacaacaattgacaagtaacacagcactaaaaaca
attagtgacaaccattatggtattgcagttggtgcagagtctctgtttgtggcgttaaat
gatcaggcattagcatcaattgttggtgcttatcaacgttttggatttcctaaaatggcg
ctcacacccaatcaagatacggcattggcacaacaaattgaggatagcgttgcgcagcac
catgctaaggctcaagaagatttacaaaaagctattaaagctagtgagcagactaaatct
aagtcatcatcggaaggtgttgcactgacattaggtcggaaaattgctgctgattcagaa
attacacgtttagagactattgatagcgaggaacatcgcgtcgttgttgaaggctatatt
tttgccagtgaaatcagagaactacgatctggcagaaagttaatgaccatcaaaatcact
gactattcaagtgctattgctgctaagaagttttcaaataacgaaactgatgaggctgta
tttgatggcttaaaaacaggtatgtgggtgcggatgtcaggtaatatccaagaggacacc
tacgcgcgcgagctggttttaaatatctatgatttacaagttatcgatcatgatagtcgt
caggaaacttatactgaagatgtgaaacgtattgaattacatgtccattcaacgatgtca
acaatggatgctgtaacaaattatgctgctgttgcgcaattggctaaaagttggggacaa
gaggcgcttgcagttgtggataccgcgaatgttcaaggttttcctgaagcggtggcggca
ggtgccaaaaatgatttaaaaatgatttatggtatggaagccaatctggttgaagatggc
gaaccaattggatttaatttaaccccagttgaattgttagataaagagacgatttatgtt
gcgtttgatttagagacaacaggattatcagctgtaacggacaagataattgagttatca
gcggttaagatgcaactaggtaatgttatcgaaaagttctcggaatatattaatcctggt
tttcctttgtctgattttacaaccaaattaacgtcaattacagacacaatggttgcccat
gccgatactgaagaaaatattattacccgattccgaaagtggattggtgatgcagttttg
attgggcataatgtcacttttgatattggttttatgaatgctgcatatgcaagatataat
caaacagtcattaaaaacccagtgattgataccttacctttcacacgttggttatatcct
gattacaagtcctatcgtctaggaacactagctaagcgttttaatattaatctggaacag
gcccatcgcgctatttttgatgcagaaacgactgggcacattgcttggcgtttaattaaa
gaggtcaatacgcgttatgagttaacgcgacataatcaactcaatgattatatgacggat
ggtgatgcttggaagcatggccggcctgtacatgcgacattgcttgttcaaaatgcggtt
ggtttaaaaaatttgtataagttagtttcacgatcaaatattgatttttttgctcgtgta
ccacgtattccacgatctattctgaatcaataccgtgaagggttgattatcggtacaggt
gatacaagtggtgacgtcattatgacattgattgagaaaggccgcgaagaggcactgaaa
aaagcaaaatattatgattacattgaaattcaacccacagctaactatgcgccgatgatt
gaatcagagttagttgccaatgaaactaaattgcacgatattttgaaagagatggtttca
attggcgagacacttgataaaccagttgttgtcacgggagatgttaaatacacgaatcca
gaagataaaatttatcgcgatattttaattgccacccaaccagggaatccgcaaaacaga
acagcattaccagaattatatttccgtacaactcaggcattgttaactgatttttcattt
atgggcaatgacgtggctaaaaaaattgtcattgataatacgcatattgttgcagatatg
ttggaggcaattacaccattaaaaagtggttcatatccaccaaatattcccagtgccgga
gacgaattaactagtagaacactggcaaccgctaaaaaatggtatggtgatcctttacca
agtgttattcaatcacgtattgatcaagaactgcaagccattattggtaacggattcgca
ccgcattatatgatttcacagcgcttagttgaaaaatcaaataaggacggttatcttgtt
ggttcacgtggctctgttggttcttcctttgttgctacaatgtctggcattaccgaagtt
aatccgtttgcgcctcattatcgcagtgctcatggtgattattttgaattagctgacccc
aaaatttatgagtctggttatgatttgcctgataaagcggatcctaatcacccaggtgaa
atgttaattggcgatggtcaaaatattccatttgaaacatttatgggatttaagggagat
aaagtgcccgatattgatttgaacttttctggtgattatcaacccattgctcataattat
atgaaagtattatttggagagcataatgtctatcgtgcaggcacaattgcaacagtcgct
gagaaaacagcttttggttacgttaaaggatatgagcgagatcatgaaaaacaatatcgt
ggcgcagaagttgaacgactagcacaaggtgttacgggggttaagcgtacgacaggccaa
catccaggtggtattttgattgtgcctcgtgaatatgaagtatatgacttcacaccagta
cagtatcccgctgatgaccaaaaatcactttggcaaacaacacacatggattatcatgcg
attcatgataatctgttaaaaatggatattttgggtcatgatgatccaactatggttcgc
accttaaaggatatgtctggtattgatccccaatctattccagcaaatgatccaggtgtg
ctaagcttgtttacatcaccaaaagcattaggtgtgacagaagaccaaattttctcaaag
acagggacattaggattaccggaatttggcactagttttgtgcgtggcatgttagaagaa
acgcaaccacatacatattctgaattgttacaaatttcaggattgtctcatggcactgac
gtgtggttaggaaatgccaatgagttaattgaaaatgggacagcgacaatcggtactgtt
attgggacacgtgataagatcatgacagatttgattaactggggatttccagctgctgat
gcttttaatgtaatggaaaaagtacgaaaaggaaaaggcattaccgatgcctatcaagcg
caattacgcgaagcaaaaataccggaatggtatattcagtcaatgctaaaaatcaaatac
atgtttccccgtgcacatgcggcagcgtatgttttgatggcattgcgtattgcttatttt
aaagtttacttcccaacgatttattatgcaacttatttttctgttcgtgcagatcagttt
gatattgtagctatgagccgtggaaaaaatgccacaaaagaagcgatgaaaaaaatacga
acgcttggaaatgatgcgactgtgggtgacaaaaatctcttaacagttttggaaatggcc
aacgaagcattagaacgtgggataacattttcgatggttgatttatataaatcagaagcc
agtgagtgggttattgatggcgaaacactgattccgccattctctgctgttccgagttta
ggagataacgtggctaaacaaattatcgttgcacgtcaagataagccttttttgagtaag
gaagatcttaaaaagcgagggaaagtctcacaaacggttattgaatacttatcacgcaat
tctgtgttggacggcatgcctgatgaaaatcagttgagtttatttgatttttaa
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