Leuconostoc kimchii: LKI_02090
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Entry
LKI_02090 CDS
T01233
Name
(GenBank) metallo-beta-lactamase superfamily protein (putative)
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lki
Leuconostoc kimchii
Pathway
lki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LKI_02090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lki03019
]
LKI_02090
Messenger RNA biogenesis [BR:
lki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LKI_02090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ADG39961
UniProt:
D5T112
LinkDB
All DBs
Position
complement(390915..392735)
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AA seq
606 aa
AA seq
DB search
MTDLSIIPFGGVRENGKNMYAVTVADEIFIFDAGLKYPETDQLGVDVVVPDFEYFIKNSD
KIAGVFLTHGHADAIGALPYFLQQVQAPIFGSELTIELAKLAIKEQEALKDYNDYHIINE
KTEIDFGKVTVSFFNTTHSIPDSLGIVLGTPYGQVVYTGDFKFDQTSDAGYETDIPRLVE
VGRGKVLALLADAAGTGNDLDSVNESKISEYILETFRENKQKRIIVAAVASNIQRIQQVI
DATVATKRQLVLSGNDIENVVRTAIRLRKLNLPIPESKLFVNLKNAKNLPISETVILETG
RMGEPIKHLNRMANGEDPYIHIGVDDLVFITTTPSTAMESVVAKTRDMLFKRGADVKQIS
SDLRSSGHASRNDLQMMINLLKPQYFMPVQGEYRVMTSAKAAAEEVHIVEDHIMMAMKGD
QFKWQSDHFELQDSFTVGETLIDGSGIGDIGNVVLRDRRILSEDGIFVSVVTIDRKKRQV
VSKPKLTSRGFVYVKANRDLMKEASEITVKQIETYLTTTKNFDWNELKNGVREVLSRFLF
EQTRRRPMVMPVVMEVNQNRRPMAHKSVQTGAQTRTRQVVKNEKSNSITTKSSKKRGKKT
IVKAAE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacagatttgagtattattccgtttggcggcgtacgcgaaaacggtaagaacatgtat
gccgttacggtggcagacgagatttttatttttgatgcaggattaaaatacccagaaaca
gatcaacttggggttgatgttgttgtacctgattttgagtattttattaaaaatagtgac
aaaattgcaggtgtctttttaacacatggccacgcagatgccattggcgcattgccctac
tttcttcagcaggttcaagcacctatttttggttccgaattgaccattgaattggcaaaa
ttagctattaaagaacaagaggcattaaaagattataacgattaccacattatcaacgaa
aaaacagaaattgattttggaaaagtaacggtgtcattttttaacacaacgcattctatt
ccagattcactaggtatcgtgttaggcacaccttatggacaagtagtttatactggtgat
tttaagtttgaccagacctcagatgcaggttacgagactgatataccacgtcttgtagaa
gtcggacgggggaaagtacttgcgttgttagccgatgctgctggtacaggcaatgattta
gattctgttaatgaatctaaaattagcgagtatattcttgaaactttccgagagaataaa
caaaaaagaatcattgtggcagcagttgcctcaaatattcagcgtattcaacaagttatt
gatgccactgtagcgacaaaacgacaacttgttttatctggtaatgatatcgaaaatgtc
gttcgaacagctattcgtttacgtaaactcaatttaccaattcctgaaagtaagctattt
gttaacttgaaaaatgctaaaaatttgcccatctcagagactgttatccttgaaactgga
cgtatgggagaaccgattaagcatttaaatcgtatggctaacggagaagatccatatatt
catatcggtgtagatgatctggtgtttattacaacgacaccatcaacagcaatggaaagt
gttgttgctaaaacgcgtgatatgctctttaaaagaggtgcagatgttaaacaaataagt
agtgatttgcgttctagtggacatgcatcacgtaatgatttacagatgatgatcaatctg
ttaaaaccgcagtattttatgcccgttcaaggtgaatatcgtgttatgacgtctgccaaa
gctgctgctgaagaagttcatattgtggaagatcacatcatgatggccatgaaaggggat
caattcaaatggcaaagcgatcattttgaattgcaagactcctttactgttggcgaaaca
ctgattgatggttcaggtattggcgatattggtaatgttgttttgagagatcgtcgaatt
ttgtcagaagacggtatttttgtgtctgttgtcacgattgatcgtaagaaacgacaagtt
gtttctaaaccaaaattgacatctcgcgggtttgtttatgttaaggcaaaccgtgatttg
atgaaggaagcttctgaaataacggtgaaacagattgaaacttaccttaccacaactaaa
aactttgattggaacgaactgaaaaatggtgtgcgcgaggttctgtcacgctttttgttt
gagcaaacacgtcgacgccctatggttatgccagttgttatggaagtgaatcaaaaccgt
cgtcctatggcacataaatctgtgcagacaggggcgcaaacacgtacacgtcaagttgta
aaaaatgaaaaaagcaactcaattacaacaaaatcatcaaaaaaacgcggtaaaaaaacg
attgtaaaagctgcagaataa
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