Leuconostoc kimchii: LKI_05630
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Entry
LKI_05630 CDS
T01233
Name
(GenBank) excinuclease ABC, subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lki
Leuconostoc kimchii
Pathway
lki03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LKI_05630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lki03400
]
LKI_05630
DNA repair and recombination proteins [BR:
lki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LKI_05630
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LKI_05630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
nSTAND1
AAA_21
nSTAND_NTPase5
AAA_22
nSTAND3
DnaJ_CXXCXGXG
AAA_25
AAA_23
AAA_33
AAA_14
AAA_18
ATPase
Viral_helicase1
SLFN-g3_helicase
APS_kinase
NB-ARC
nSTAND6
NACHT
cobW
MMR_HSR1
ATPase_2
DUF87
RNA_helicase
NTPase_1
DAP3
PRK
Septin
T2SSE
MeaB
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
ADG40667
UniProt:
D5T318
LinkDB
All DBs
Position
1095248..1098118
Genome browser
AA seq
956 aa
AA seq
DB search
MAKTNIEIRGARVQNLKNIDVDIPKDKLTVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSNNPRSTVGTVTEINDYFRLLYARVGRP
DDPKDGTKIMVTVDQMVTYIFDHLALGVRLLVFAPVITAKRGSHETAFDSMRKQGYIRAR
VDGEVLELDTQDLKLDKNKAHDIEVMIDRIVLRNDSRSRLYDSIEAAVRLTGGLVQLDVV
TRDGEEQVAPLKFSDHYLGKLKDFRVGRLEPRLFSFNAPLGACPVCQGIGVTREVDIDLV
VPDESKTLREGAISPWNPISSNYYPEMLRQFSEQNGIDLDTPFESLPKVHRDLILDGSGN
QDFHFHYQNDFGGVRDVDVPFEGVISNVARRFNETNSDYTRDQMAKYMTELTCQSCHGYR
LNSAALSVKINGYHIGEVSEMPVDQELTFFDDVKLGEQDTAIATPILKEIKDRLGFLESV
GLKYLTLSRAARTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDMLLESMHR
MRDLGNTLVVVEHDEDTMLAADYLIDVGPGAGELGGKIVATGTPATVAKNKNSLTGQYLS
GQKFIPVPVTRRKGNGNYITIKGAKENNLKNVTVKFPLGKFVAVTGVSGSGKSTLVNQIL
KRALKQKINNNSEKPGKYRSIEGVENIEQIVDIDQAPIGRTPRSNPATYTGVFDDIRDLF
AQTNEAKMRGYNKGRFSFNTKGGRCENCRGDGVIKIEMNFLPDVYVTCEVCHGTRYNSET
LEVLYKNLNISQVLDMSASDALEFFAPIPKIARKLQTINDVGLGYIRLGQSATTLSGGEA
QRMKLASELHRRTNGKTMYILDEPTTGLHVDDIARLLIVLQRLVESGNTVIVIEHNLDVI
KSADWLIDMGPEGGEGGGNVLVSGTPEKVTKNEKSYTGKYLNAIMARDINRANTQS
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaactaatattgaaatacgtggcgctcgcgtccaaaatttaaaaaatattgat
gtagatattcctaaagacaaattaacagttgtgactggcttatcaggatcaggcaagtca
tcccttgcctttgatacgctttatgccgaaggacaacgacggtacgttgaaagtctttca
tcttacgcgcgtcagtttctaggccaaatggacaagccagatgttgactctatcgatggg
ttatcaccagctatctctattgaccaaaaaacgacttctaataatccgcgttctactgta
ggtacagttactgaaattaatgattattttcgattactttatgcgcgtgttggtcgaccg
gatgatcctaaagatggcactaaaattatggtgactgttgaccaaatggtcacctatatt
tttgatcatttagcgcttggtgtgaggttgttagtgtttgcgcctgtcattacagcaaaa
cgtggttcccatgaaacggcgtttgatagtatgagaaaacagggatatatccgtgctcgt
gttgatggtgaagttttggaactggatacacaggacttaaaattggacaaaaataaggca
catgatatcgaagtgatgattgatcgtattgtgttgcgtaatgattcgcgttcacggctt
tatgactcaattgaagcagctgtgagactaactggcggtttagtccagttagatgttgtc
acacgtgatggcgaagaacaagttgctccgcttaagttttctgatcactatctaggcaag
ttaaaagattttcgtgtcggccgtttagaacctagattatttagttttaatgcgccattg
ggtgcatgcccagtttgtcagggcatcggtgtgacaagagaagtggatattgatttggtt
gtgccagatgaatctaaaactttacgtgagggtgccatttcaccatggaatccgatatca
tctaattattatccagagatgttacgtcaattttcagaacaaaatggcattgatttagat
acaccattcgaatcattacccaaagtgcatcgtgatctaattcttgatggttcaggaaat
caagattttcattttcactaccaaaatgattttggtggcgtccgtgatgttgatgttcct
tttgagggtgtcattagtaatgtggcaagacgttttaatgaaactaattcggattacaca
cgtgatcaaatggctaaatacatgacagagctgacttgccaatcatgccatggctatcgg
cttaactcagcggcattatcagtaaaaatcaatggttatcatattggtgaagtatctgaa
atgcctgttgatcaagaattaacattttttgatgatgttaagctcggggaacaagacaca
gcaattgcgacaccaatccttaaagaaattaaagatcgtttaggctttttagaaagtgtt
ggtctaaaatacctgaccttgtcgcgcgcagcacgtacgctttctggtggtgaatcacaa
agaatccgtttagcgactcaaattgggtcaaatttgtccggagtattgtatgtgttagat
gaaccatcaattggcttacaccaaagagataatgatatgctgctagaatcaatgcatcgt
atgcgtgatttgggcaatacattggttgttgtggaacatgatgaagatacgatgttagca
gcagattacttaattgatgttggtccaggtgctggtgaattaggcggtaaaattgttgca
acagggacaccagcaaccgttgcaaaaaataaaaattcattgactggtcaatatttatct
ggtcaaaaatttattcctgtgccagttactcgtcgcaaaggtaacggtaattacatcaca
attaaaggtgccaaagaaaataacctcaaaaatgtcaccgtgaaatttcctttgggtaag
tttgtggcagtaactggtgtttctgggtcagggaaatcaacgcttgtcaatcaaatttta
aaacgtgctctcaaacaaaaaattaataataattcggaaaagcctggtaaatatagaagc
attgaaggtgttgaaaatatcgaacaaattgtcgatattgatcaagcaccaatcggtcgg
acgccacgttctaaccccgctacctacactggtgtatttgatgacattcgtgatttgttc
gcacaaactaacgaagctaaaatgagaggatataacaagggacgtttctcatttaataca
aaaggtggacgttgcgaaaattgtcgtggtgatggtgtgattaagatagaaatgaacttt
ctaccggatgtctatgtcacatgtgaagtgtgtcatggaacacgttataattctgaaacc
ttagaggtattgtataaaaatttaaatatttcccaagttttggatatgtcagcttccgat
gcattagaattttttgcgccaattcctaaaattgcgcgtaaactacaaactattaatgat
gtcgggttgggttatatcagattaggtcaatctgctacaacgttgtccggcggtgaagcg
caacgcatgaaattggcttcagaattgcatcgacgtacaaatggtaaaaccatgtatatt
ctagatgaaccaacaactggtctacatgttgatgatattgcccgtttgcttattgtatta
cagcgattggttgaatcaggaaatactgtgattgttattgaacataatttggatgtgatt
aaatctgctgattggctgattgacatgggaccagaaggcggtgaaggcggtggaaatgtt
ttggtatctggtacaccagaaaaagtcactaaaaacgaaaaatcatatactggaaaatat
ttaaatgcaattatggcaagagatattaatcgtgctaatacccaaagctag
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