Leuconostoc kimchii: LKI_06180
Help
Entry
LKI_06180 CDS
T01233
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lki
Leuconostoc kimchii
Pathway
lki00040
Pentose and glucuronate interconversions
lki01100
Metabolic pathways
lki02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LKI_06180
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LKI_06180
Enzymes [BR:
lki01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LKI_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
DUF2436
DNA_pol3_a_NII
Motif
Other DBs
NCBI-ProteinID:
ADG40776
UniProt:
D5T3C7
LinkDB
All DBs
Position
complement(1204660..1205949)
Genome browser
AA seq
429 aa
AA seq
DB search
MTKTRHKQHIIVAFTIGITALGLTSCINAATIPTSLQKNSREVANASQGFAAGTTGGSKA
DAAHTYQVTNRIELLNALGNETNKTNKIIYVSGTINMNVDNNSKALTANNYANGTGYNLA
AYLKAYDPSTYGKKLPTGSQETARNKAQKNQAKQVQYKIPSNTTIIGNSNAKITGGNMII
NSQNVIVRNIIFENAYDFFPQWDPTDGTSGNWNSQYDNLTVTGGSHVWLDHNRFFDGTQT
DNQNGSYYGREYQHHDGLVDIVNGATNVTLSYNALQNHDKSMNIGNSDSKTTDAGKLRVT
MHHNRFDNLVQRQPRVRFGQVHMYNNYYSATNTSIYKFMYAFGVGKQSQIYAQNNIFDIP
NLATKNIAKVFGGSNFTDSGTLLNGQKVTGIATSNKLSPASWTPQYKNMLQDPAAAKTAV
ISSAGPTLK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaagacataagcaacatattattgttgcatttaccataggcatcacagca
ctcggcctaacttcttgcattaatgcagcaaccattcctaccagtttgcaaaaaaattca
cgagaggtggcgaacgcttcacaaggatttgctgctggcacaacaggtggtagcaaagct
gatgctgcacatacttaccaagtaactaatcgtatcgaattacttaatgcattaggtaat
gaaacaaataagacaaataaaatcatttatgtttctggtacgataaatatgaacgttgat
aataatagcaaagctttaacagctaataactacgccaacggcacaggttataatctagct
gcttatctaaaagcctatgatcccagtacttatggtaaaaaattacctactggatcacag
gaaacggcgcgcaataaagcccaaaaaaatcaagctaagcaagtccaatacaagataccg
tccaacacaacaattattggtaatagcaatgctaaaattacaggcggtaatatgatcatt
aatagtcaaaatgtcattgtccgtaacatcatatttgaaaatgcttatgatttttttcca
caatgggacccaactgatggcacgagtggtaactggaattcacaatacgataatttaacc
gtcactggtggatcacatgtctggttggatcacaatcgtttttttgacggtacacaaact
gacaatcaaaacgggtcatactacggtcgtgaataccaacaccatgacggtttagtggat
attgtaaatggcgctactaacgttaccctttcatataatgcactgcaaaatcatgataaa
tcaatgaatattggtaatagtgatagtaaaaccactgatgcaggtaagctacgtgtaaca
atgcatcataatcgctttgacaatttagttcagcgccaaccgcgtgtccggtttggacaa
gttcacatgtataataactactattcagcaaccaacacgtcgatttacaaattcatgtac
gcttttggtgttggtaaacagtctcaaatttatgcacaaaataatatttttgatatacca
aacctcgcaactaaaaacattgcaaaagtatttggcggatccaatttcacggatagtggc
actttgttgaatggtcaaaaggtaaccggcatagcaacaagcaataaactaagccctgca
tcttggacaccacaatacaaaaacatgttgcaagaccctgccgctgctaaaacggcagtc
ataagtagcgccggcccaacgttaaaataa
DBGET
integrated database retrieval system
