Leuconostoc kimchii: LKI_08395
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Entry
LKI_08395 CDS
T01233
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lki
Leuconostoc kimchii
Brite
KEGG Orthology (KO) [BR:
lki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lki03019
]
LKI_08395
03009 Ribosome biogenesis [BR:
lki03009
]
LKI_08395
Enzymes [BR:
lki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LKI_08395
Messenger RNA biogenesis [BR:
lki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LKI_08395
Ribosome biogenesis [BR:
lki03009
]
Prokaryotic type
rRNA helicases
LKI_08395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Flavi_DEAD
DUF7627
Motif
Other DBs
NCBI-ProteinID:
ADG41218
UniProt:
D5T588
LinkDB
All DBs
Position
1656948..1658315
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AA seq
455 aa
AA seq
DB search
MAEIANQFGQFNLSPEIITALTAIGFTKPTPVQAKLIPSILKGNDVVGQSQTGSGKTHTF
LIPIFNQLEQNKAYAQAVITTPSRELAAQITKAAKDFSEQWHQDAIISEFVGGTDKLRQI
KQLEKGQPQIVIGTPGRIKDLVASGALKLHAVKTFVVDEADMTLDMGFLNEVDFIAGVMP
ANLQTLVFSATMPEKLKPFLKKYLDNPQFEAIPVSTVIADTIDNWLLATKSKDKNDVIYQ
VLTIGNPYLALVFANTKDRAKEIVSNLRGRGLKVAEIHGDIEPRERRRVMKAIQNLEYQY
VVATDLAARGIDITGVSHVINDDIPEELEFFVHRVGRTGRNGLPGLAITLYGPDEENEVE
ELEALGINFKAKQIKDNEIVDIKDRRARKQRVATTRKLDPTMVGMVKKKKKIVKPGYKRR
IKKALQRKDQMDRRISKREDMRAIRKENKKRGDNQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaattgcaaaccaatttggacaatttaatttaagtcctgaaattattaccgct
ttgacagccattggctttacaaagccaacgcctgttcaggcaaaacttatccctagtatt
ctgaagggtaatgatgttgttggacaatcacaaactggatcaggaaaaacacacactttt
ttgattccgatatttaatcaattagaacaaaacaaagcatatgctcaagctgttataaca
acgccatcacgtgaattagctgcacaaattacaaaagcagccaaagatttttcagaacag
tggcatcaagatgctattatttctgaatttgtaggcgggaccgataaattacgtcaaatt
aagcagcttgaaaaagggcaaccacaaattgtgattggtacaccgggtcgtattaaagat
ctagttgcttcgggtgctctaaaattgcacgccgtaaagacttttgtcgttgatgaagct
gatatgacgttagacatgggattcttgaacgaagtagattttattgctggtgtgatgcca
gcaaatttgcaaaccctagtctttagtgccacgatgcccgaaaaattgaaaccatttcta
aaaaaatatttagataatccacaatttgaagcaattcctgtatcaacggtcattgcggat
acaattgataactggttgttagcaacgaaatctaaagataaaaacgatgtgatctatcaa
gtattaacaatagggaacccttatttagccttagtttttgctaatacaaaagatagagca
aaagaaattgtttctaacctacgtggtcgcggtttaaaagttgcagaaattcatggtgat
attgaaccacgagaacgacgtcgtgtgatgaaagctattcagaatttggaatatcaatat
gttgtggcaactgatttagcagctcgaggtattgatattactggtgtatcacatgtaatt
aatgatgatattccagaagaattagagttttttgtccatcgtgttggccgaacaggccgt
aatgggttacctggtctggcgattacactgtatggtccagatgaagaaaatgaagttgaa
gaattagaagctttgggtattaattttaaagctaagcagattaaagataacgaaattgta
gatattaaggatcggcgtgctcgtaaacaacgtgtagcgacgactcggaaacttgatccg
acaatggtaggtatggttaaaaagaagaagaaaattgtgaagccaggctataaacgtcgt
atcaaaaaggcacttcagcgtaaggatcaaatggatcgacggatttcaaaacgagaagat
atgcgtgcaatacgcaaagaaaataaaaaacgtggtgataatcaataa
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