Leuconostoc kimchii: LKI_09845
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Entry
LKI_09845 CDS
T01233
Name
(GenBank) DNA-directed DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lki
Leuconostoc kimchii
Pathway
lki03030
DNA replication
lki03430
Mismatch repair
lki03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LKI_09845
03430 Mismatch repair
LKI_09845
03440 Homologous recombination
LKI_09845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lki03032
]
LKI_09845
03400 DNA repair and recombination proteins [BR:
lki03400
]
LKI_09845
Enzymes [BR:
lki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LKI_09845
DNA replication proteins [BR:
lki03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LKI_09845
DNA repair and recombination proteins [BR:
lki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LKI_09845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
DUF835
Motif
Other DBs
NCBI-ProteinID:
ADG41508
UniProt:
D5T4N7
LinkDB
All DBs
Position
1932820..1936161
Genome browser
AA seq
1113 aa
AA seq
DB search
MYAPLQILSAYSLLKNPNTIEQIIQVAKERHYEAVALTDINVMYGAVDFYQTARKYGIKP
LFGLTLLINGLVNTATTFPVLLIAENQAGYQNLMWISSAKMTSKSSDMTLTIIADHLDGI
NVILSQDSELAQFIAAEYDDATDYWQDLTTKIKPENVYLGINPSLAPQIQSRLVNFSLAN
QARLIALDDIDYLNPDDAFTTQVLKAIDANAQLDGVKVLSQQLGTHTLEDLNQVKAAYLT
TDALKMAYQHNEQLVSKSHVDIMFKQTASLPSFELPNSEQTSGEYLQFISEKGLSNRLKG
RKLPEDHYSKRLKHELQVINHLGFNDYFLIVWDIVNFAHQKNIQMGAGRGSAAGSLVAYA
LGITDVDPLQFGLLFERFLNPDRVQMPDIDIDWPDNKREAILTYLHDKYGQRNFAQIITF
GTLAAKQALRDTARVFGVSQAMMSRISRAIPQPKQGRKVSIQDALESSDNLKNTLSTIEN
GDLLLKVAQQIEGLPRNYSTHAAGVVLSADVLVKTLPVQSGTDDRLLTQFEKNPVEALGL
LKIDVLGLSNLSILAQTLYVAKANLPEYFNISDVPLDDEKTLDLYAAGDTDGIFQFESPG
IKNVLRQLKPATFEHIVAVNALYRPGPSRNIETFIKRRHGLENVTMLDASLKTILAPTFG
IIVYQEQVMLVAEAYAGFTLGEADILRSAMSKKKLEKMTAMHKQFVTGAVSLGHDAKQAE
QIFAYIDEFANYGFNRSHAVAYSKLSFELAYMKAHYPVAFFTAVLNANLGSPDKVRRYVT
AAKSRGITVKPPSINRSQRFWTSDNQTLQMGLNNIRGVRTDFVTTLLEERQNNGEFQSFQ
SFVRRLPDKFRKHDILIQLVYAGALDAFGYNRAELISALDDLIEAASFGDLILNETKIKK
VAEFSSTEKLAHEKDVIGVNLSGHPLDSYLEMITTQHFQQIVDFTQKNQMITVIALVDNI
RKTRTKKGEEMAFITVSDMTGSISVTIFSHLLVKVSDLLKVGSVVQIAGKVDRYNDKLSV
IANQISLAPNVQSLMKGTWFLRFDDTHDTVENRQDVIAVLKKYHGHNPVVIHWQKNDRNQ
NLDAKFWMSDETAVIIELAPLLGNDNIVFRRSR
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcacctttacaaattttgagcgcttatagcttattaaaaaatccgaatacaatt
gaacaaattattcaagtagctaaagagagacactatgaagcagtggctctaacagacatt
aatgtcatgtatggtgcagttgacttttatcaaacagctagaaaatacggcatcaagcca
ttgtttggtctgacattgctcattaatggattggtaaacacagcaacgactttcccagtt
ttactaattgctgaaaatcaagcgggttaccaaaatttaatgtggatttcgtctgctaaa
atgaccagtaaatcatcagacatgaccttgacaattattgctgatcacttagatggtatc
aatgtcattttgtcgcaagatagtgaattagcacaatttattgcggctgaatatgatgat
gcaactgactactggcaagatttaacgactaaaataaagccagaaaatgtatacttggga
attaatcccagtttggcaccacaaattcaatcacgtttagtgaacttcagtcttgccaat
caagcacgattaattgcgttggatgatatagattatcttaatcctgatgatgcttttaca
acacaggtgttaaaagcaattgatgccaatgcacaattagatggtgtcaaagtattatca
caacaattaggaacacacactttagaagatctgaaccaagttaaggcagcttatttaaca
acagatgcgctaaaaatggcttatcagcataatgaacaacttgtttcaaaaagtcatgtt
gatattatgttcaaacaaacagcctcattgccgtcatttgaattaccaaattctgaacaa
acctctggcgaatacctacaatttatttctgaaaaagggttatcaaatcgccttaaagga
agaaaattaccagaagatcattatagcaaacgactcaagcacgaattacaagttattaat
cacttaggattcaatgattattttttgattgtgtgggatattgttaattttgcgcaccaa
aaaaatattcaaatgggcgcgggacgtggatctgcggcgggttctttagtggcctatgcg
ttaggtattactgatgttgatccactgcaatttggattgctttttgagcgctttttaaac
ccagatcgtgttcaaatgcctgacattgatattgactggccagacaataaacgcgaagca
atattaacgtacctacatgataagtatggacagcgaaattttgcccaaattataacattt
ggcaccttggctgctaaacaagcactgcgagatacggcccgagtattcggcgtatcacaa
gccatgatgagtcgtattagtcgtgcgattccgcaacctaagcaggggcgtaaagtgtcc
attcaagatgcactggaatcatcagataatctgaaaaatacactgtcaaccattgaaaat
ggtgatctgttattgaaagttgctcagcaaattgaagggttgccccgtaattactccact
catgctgcaggagtcgtattgagcgcagatgtactggttaaaacattgcccgtgcaatcg
ggaacggatgaccgtttgctaacacaatttgaaaaaaatccagtagaagctttaggattg
cttaaaattgatgtgttagggctatctaatttatctattttggcacaaacactctatgtg
gcaaaagcaaatttgcctgaatatttcaatattagcgatgtgccacttgacgacgaaaag
acactggatttatacgccgcaggtgatacagatggtatttttcagtttgaatcaccaggt
attaaaaatgttttacggcaattaaagcctgctacttttgaacatattgtagcagttaat
gcattgtatcgtccaggacctagtcgtaatattgagacatttattaagcggcgtcatggt
cttgaaaatgtcaccatgctagatgccagtttgaagacaattttagcgccaacgtttggt
attattgtttatcaagaacaagtgatgttggtcgctgaagcgtatgctggattcacttta
ggggaagctgatattttacgcagtgcgatgtctaagaaaaaacttgaaaaaatgactgca
atgcataaacagtttgttacaggtgctgtatcattagggcatgatgctaaacaagccgaa
cagatttttgcttatattgatgaattcgcaaattatggatttaatagatctcatgccgtt
gcatatagtaagttatcttttgaactcgcctacatgaaagcacattatcccgttgctttc
tttactgcggtattgaatgctaatttgggttcacctgataaagtacgtcgctatgtcacg
gctgcaaaatcacgtggtattactgttaaaccgccaagtatcaatcggtcacagcgattt
tggacatcagataatcaaacgctacaaatggggttaaataatattcgaggtgtgcgaact
gattttgtgacaacgttgctagaggaacggcaaaataatggcgagtttcaatcctttcaa
tcgtttgtacgtcgtttgccagataagtttcgtaagcatgatattttgattcaacttgtt
tatgctggtgcattagacgcttttgggtataatcgagcagagttaattagtgcgcttgat
gatttgatcgaggctgccagttttggagatctcattttaaatgaaactaaaatcaaaaaa
gtagctgagttttcttcaactgaaaaattagcacacgaaaaagatgtgattggcgttaat
ttatctgggcatccgctggacagttatttggaaatgataacgacacaacattttcagcag
atagtagatttcacgcaaaaaaatcaaatgataacagtcattgcgcttgttgataatata
cgcaagacccgtacaaaaaagggtgaagaaatggcttttatcacagtatctgatatgaca
ggtagtatcagtgtcaccatttttagtcatttattagtcaaagttagtgatttattaaaa
gtaggatccgttgttcagattgctggtaaagtggatcgttataacgataaactatcagtt
attgccaatcaaattagtttggctccaaacgttcaatcgctaatgaaagggacttggttt
ttgaggttcgatgacacacatgatacggttgaaaatcggcaggatgtgattgctgttctg
aaaaaatatcatggtcataatcctgttgttattcactggcaaaaaaacgatcgcaatcag
aatcttgatgcgaaattttggatgagtgatgaaaccgctgtcattattgaattggcgcca
ttactagggaacgataatattgtgttccgcagaagtcgttaa
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