Lactobacillus kullabergensis: DKL58_01090
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Entry
DKL58_01090 CDS
T06382
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lkl
Lactobacillus kullabergensis
Pathway
lkl03420
Nucleotide excision repair
lkl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DKL58_01090
03430 Mismatch repair
DKL58_01090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkl03400
]
DKL58_01090
Enzymes [BR:
lkl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DKL58_01090
DNA repair and recombination proteins [BR:
lkl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DKL58_01090
MMR (mismatch excision repair)
Other MMR factors
DKL58_01090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
AAA_22
SLFN-g3_helicase
Viral_helicase1
Catalase_C
AAA_30
DEAD
DUF3463
NACHT
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AWM74677
LinkDB
All DBs
Position
228889..231183
Genome browser
AA seq
764 aa
AA seq
DB search
MTKAMDDREFEQKHLDKILKMIRAKKAELSSSIKSAEGEAQDLNSHFFDDVKLDYDGYST
SMETALSIHQQQQLLDERQNAWQHAAKQLSTVQKLEQKPYFARVDFKETNEKPETIYIGL
GSFADKNNHFLIYDWRAPISSIYYDGKIGKVSYMSPEGEITVDMTKKRQFIIENGKIINM
FDTNESIGDQMLLEVLGEKSGTQMKSIVTTIQREQNKIIRNTSADLLFVQGAAGSGKTSA
ILQRIAYLLYRYRGNLTSSDVIMFSPNQLFNDYIKNVLPEMGEQNMVQMTYWQFVARRLP
GMTVENLFDQFEDSKADSAISQFKDSTNFFNLLHHYAKHLNNRGVIFKNIYFRNKKKPFF
TKEKISELYYSFNSNYNLSNRIDATREGLIKSLNRKINSETKKAWVSDAIQNLSQEQLNA
LYDRPDQEFESEEKEEKFLSRKIVVKALDKVFQQIRRNNFINMRAQYLNFLRAVPKMTDL
SKWRIEEANWQKHIEEVKQSFMKHYIHMNDVSAYLYLYDLITGRHVDFEMRYAFIDEIQD
YTPFQLCYLKYNFPRAKFTMLGDLNQAIFTKDESRSLLKQISGLFDPEKTDVVQLTKSYR
STKQLTEFTKQILRQGEKIESFDRQGPKPALWQRSDDAATIKVLEQILDENNQANMTTAI
ITKDLDSAKIVAEKLKEDKVKATLIATANQRLVDGTLVIPSYLAKGLEFDAVIMWAASKE
NYHRIDETQLVYTITSRAMYKLDIVYTNEKSPLLEVDPKTYIEK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcgatggatgatagagaatttgagcaaaagcatcttgataagattttaaaa
atgatacgggctaaaaaagccgagttgtcctcgtcaattaagtccgctgaaggagaggcc
caagatcttaattcacacttttttgatgatgtaaaattagattatgacggctattcaaca
tctatggaaactgctttgtctattcaccagcaacagcagttgcttgatgaacgtcaaaat
gcttggcagcatgccgcaaagcaactaagcactgttcaaaaattagagcaaaagccatat
tttgccagagtagattttaaagaaaccaatgaaaaaccggaaactatttatattggtctg
ggttcttttgcagacaaaaataatcattttttaatttatgattggcgtgcaccaatttca
tcaatttattatgatggcaagattggtaaggtttcttatatgtcgcctgaaggtgaaatt
accgttgatatgaccaaaaagcggcagttcataattgaaaatggcaagattattaacatg
tttgacaccaatgagtctattggtgatcagatgctgctggaagttttaggtgaaaaatcc
ggcacgcaaatgaaatcaattgtgacaacgattcagcgtgagcagaacaaaatcattagg
aacaccagtgcagacttattgtttgttcaaggagcggcaggctctggtaaaacttctgca
atattacagaggattgcctatctgctatatcgctatcgcggcaaccttaccagtagtgat
gtcatcatgtttagtcctaatcaattgtttaatgattatatcaaaaatgttttgcccgag
atgggtgaacaaaatatggtacaaatgacatactggcaatttgtagcaagacgattgcct
ggaatgactgttgaaaatttatttgatcaatttgaagacagcaaagctgattctgcaatt
agtcaatttaaagattctacaaatttctttaatttgctgcaccattatgctaaacacctc
aataatcgaggtgtaatttttaaaaatatttacttccgcaataaaaagaaaccatttttt
acaaaagaaaaaatcagtgaactctattattcatttaattccaattataatttgagcaat
agaattgatgctacgcgagaaggattaataaaatcactcaatcgcaagattaacagcgaa
actaaaaaggcctgggtgtctgatgccatccaaaatctcagtcaagagcagctgaatgct
ttatatgatcgtccagaccaggagtttgaatcagaggaaaaagaagaaaaattcctcagc
cgtaaaattgtcgtgaaggcacttgataaagttttccagcaaattagacggaataatttt
attaatatgcgtgcacaatatttgaactttttacgtgctgttcctaaaatgactgaccta
agtaaatggcgaattgaagaagcaaattggcaaaaacacatcgaagaagttaagcaaagt
tttatgaagcattatattcatatgaatgatgtttcggcctacttgtacctttatgatctg
atcacaggtcgtcatgtagattttgaaatgcgttacgcttttattgacgagattcaagat
tatacgccgtttcagctgtgctatctgaaatataattttcctcgggctaaattcacgatg
ttgggtgatttaaaccaggctatttttaccaaagatgaaagtagaagtctgcttaagcag
atcagtggtttatttgatcctgaaaaaactgatgttgtacagttaaccaaatcttatcgt
tcaacaaaacagttgactgaatttaccaagcaaatcctgcgacaaggtgaaaaaattgaa
tcgtttgaccgtcagggtcctaaaccagctctttggcaacgttctgatgatgctgctaca
atcaaggtactggaacaaatactagatgaaaataatcaggctaacatgacaactgcaatt
attaccaaggacttggacagtgccaaaatagtggcagaaaagctcaaagaagacaaagtg
aaagcaacattgattgccactgccaatcagcgcttagttgacggcactttagtgattcca
tcttatttagctaaaggcctggagtttgatgccgtcattatgtgggctgcctcaaaagaa
aattatcatcgcattgatgaaacgcaacttgtatacacaataacttcgcgggcgatgtac
aagcttgatattgtttatactaacgaaaagagcccacttctggaagtagacccgaaaact
tatatagaaaagtag
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