Lactobacillus kullabergensis: DKL58_04465
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Entry
DKL58_04465 CDS
T06382
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lkl
Lactobacillus kullabergensis
Pathway
lkl03030
DNA replication
lkl03430
Mismatch repair
lkl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DKL58_04465
03430 Mismatch repair
DKL58_04465
03440 Homologous recombination
DKL58_04465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lkl03032
]
DKL58_04465
03400 DNA repair and recombination proteins [BR:
lkl03400
]
DKL58_04465
Enzymes [BR:
lkl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DKL58_04465
DNA replication proteins [BR:
lkl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DKL58_04465
DNA repair and recombination proteins [BR:
lkl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DKL58_04465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AWM75267
LinkDB
All DBs
Position
943469..946609
Genome browser
AA seq
1046 aa
AA seq
DB search
MKYAALQNLSSFTLLDSPIKIKDLLTTAKELGYEAVSLTDINVTYGLVNFFEVAQKVGIK
PLLGMQLRLSGLIDSAHQYDLIALAKTDEGYRNILRLSSRINLLTDNSNKQKILTIADLT
KDLNDLIFIIPANLHSELLNLQMQNESLGTDFLRHLISIIPKSSSLYIGVYGSERQKNYI
QYVRALSKQFDLPLVSVEDTCYLKPRDQFLRKTLQAIKKGEVLQDITDLAKQSGSHYLPA
IEELSERYHKLGLDEALENTEKIASVCNAKIIFQTPVLPKYKQDQYSTSKDFLQFLAKKG
LQNRFGQRKVPADYQKQLNYELQVIDQMGFNDYFLIVWDVVNYCHRVGIAMGPGRGSACG
SLVSYSLNITEVDPIKYNLLFERFLNPARHEMPDIDLDIPDNRRDDVIKYMFNKYGMDHA
AQILTFGTLAAKQVLRDTGRVFGLQEMQLSEWSKSVPFAKGKISLAQAYKESKKMQMLVN
ANDMNKLLYETASGLEGLPRHYSIHAAGLVLSDNSIAAIAGLQSGQLGIPITQQTKKYVE
SLGLLKIDFLGLRNLTILGDTEKMIREQGKKIDVNQIPLDDPATLSIFQKGETELVFQFE
SGGIRNVLRELHPDNFEDLVAVNALYRPGPMQNIKTFIARKKGTQKVTYPDPSLKPILSS
TYGVLVYQEQVMQTARVLAGFSLGEADILRRAMSKKDQKVIEQEKSKFINGAVKNGKTVQ
VATRVYDYIEQFANYGFNRSHAVAYTMIAFWLAYLQVHYPAEFYASMLNSNIGNQNKANE
YIMRAQEDGVKILPPDINKSALAYQVIDGRILVGLRAIKGVRIDFLKEIIAKRQAKSFDS
LSNFLRQIDVKFIKANSITNVVESLIKSGCFDQLNKNRNELLQNCPEIIENVKLTGENLA
LSEGLGGVPIKPAKEPSKQEMALMEEKTLGFSTLTSPLITVQKYAQKFNAKSLNEFQIHE
GGIAVGKLMSLKLVRTKKGQTMAFGSFADTTSKQDIVIFPNVYDKIQSNLKEGNIYLLGV
KVQNDRFDSSKKQYILTNLKVVNLKE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgctgcattgcaaaaccttagctcttttacccttttagatagtccgataaaa
attaaagatttgctgactactgcaaaggaattaggatatgaagctgtaagcttaactgat
attaacgtaacctatggattagttaatttttttgaagtggcccaaaaagttgggattaaa
ccacttttagggatgcaattaaggctaagtggattaattgacagtgctcaccaatatgat
cttatcgctttagcaaagactgatgagggttatcgaaatatcttgcgtttatcaagtaga
attaaccttttgacagacaacagtaataagcaaaaaattttaactattgcggatttgacc
aaggatttaaatgatttgatatttattataccggcaaatttgcatagtgagttattaaac
ttgcagatgcagaatgaaagtttaggaacagattttttgcgtcatttaattagcataata
cctaaatctagttccttatatatcggagtttatggcagtgaaagacaaaaaaattacata
caatatgtcagagcgctatcaaaacagtttgatttaccactagttagcgttgaggatacc
tgttatttaaaacctcgcgatcagtttttacgtaaaactttacaagctataaaaaaaggt
gaagttttgcaagatatcacagatttagctaaacaatctggctcacattatttgcctgct
attgaggaattgagcgaacgttatcataaattaggtttagatgaagctttagaaaacaca
gaaaaaatcgcctctgtctgcaatgctaaaattatatttcaaactccagttttgccgaaa
tataaacaggatcaatattcaacttccaaggattttctgcaatttttggctaaaaagggt
ttacaaaatcgttttggtcaacgtaaagttcccgctgattatcaaaaacagctaaattat
gaattacaagtaatagatcaaatgggctttaacgattactttttgattgtttgggatgtt
gtaaactactgccatcgagttggaattgcgatgggtccaggcagaggatcagcttgtggc
tcgttagtttcctattctttaaatatcactgaggttgatccaattaaatataacttgcta
tttgagcgttttttaaatcctgccagacacgaaatgccagatattgatttggatatacca
gataatcgtcgtgatgatgtcataaaatatatgtttaataaatacggcatggatcatgct
gctcagattctcacgtttgggactttggcagctaagcaggttttgcgagatactggcaga
gtatttggtcttcaagaaatgcaattaagtgagtggtctaaaagcgtacctttcgcaaaa
ggcaaaataagtctggctcaggcttataaagaatccaaaaaaatgcaaatgctggtgaat
gcaaatgacatgaacaagttgctttatgaaacggcaagtggattagaaggcctgccacgc
cactattcaatccatgctgccggtttagttcttagcgataattctattgccgccattgcc
ggcttgcaatcaggacaattaggaataccgataactcagcaaacgaaaaaatatgtagaa
tcactgggattattaaaaatagattttttaggcttaagaaatttaactattcttggtgat
acggagaaaatgatccgcgagcaaggaaaaaagatcgatgttaatcagatccccctagat
gatccggctactttaagtatttttcaaaagggtgagacagaactcgtctttcaatttgaa
tcaggtggaattcgcaatgttctgcgtgaattgcatccagataattttgaagatttggta
gcagtcaacgcactttatcgcccaggtccaatgcagaatatcaaaacttttattgcacgc
aaaaaaggcacccagaaagtcacataccctgatcccagcttaaaaccaattttgtcttca
acatatggtgttttggtttaccaagaacaagtcatgcaaactgcccgagttctggctggc
ttttctttaggagaagccgacattttacgcagagcaatgtcaaaaaaagatcaaaaggtt
attgaacaggaaaaatctaaatttatcaacggtgcagtaaaaaacggtaagactgttcag
gttgcgacccgtgtatatgactatattgagcaattcgccaattatggtttcaaccgttca
catgctgttgcttatacgatgatcgcattttggctcgcatacttacaagttcattatcca
gctgaattttatgcctctatgcttaattctaatattggcaatcaaaataaggcgaatgaa
tatataatgcgcgctcaagaggatggcgtaaaaattttgccacctgacattaacaaaagt
gctttagcttatcaggtaattgatgggcgtattttagttggattacgtgcaattaaaggg
gttagaatagattttcttaaagaaataattgcaaagcgtcaagcgaaatcttttgattct
cttagcaattttttacgtcagattgatgtcaaatttattaaagctaatagcattacgaat
gtggttgaatctttaatcaaatcgggatgttttgaccagcttaacaaaaatcggaacgaa
ttattacagaattgtcctgaaataattgaaaatgttaaattgacaggggaaaatctcgct
ttatcagaagggctaggtggtgttcccattaagcccgctaaagaacctagcaaacaagaa
atggctttgatggaagaaaaaactttaggcttttctacactcacttctccattaattacc
gttcaaaaatatgctcagaagtttaatgctaaatcattaaatgagtttcaaattcatgaa
ggtggaatagctgtcggcaaacttatgtcattaaaacttgtgaggaccaaaaagggtcaa
acaatggcttttggcagttttgctgacaccaccagtaagcaggatattgtaattttccct
aatgtttatgataaaattcaatcgaatttaaaggagggtaatatttatttattaggcgtt
aaagttcaaaatgatcgtttcgactcaagtaaaaaacaatatattttaactaatttaaaa
gttgtaaatttaaaagagtag
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