Lactobacillus kullabergensis: DKL58_05470
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Entry
DKL58_05470 CDS
T06382
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lkl
Lactobacillus kullabergensis
Brite
KEGG Orthology (KO) [BR:
lkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lkl03016
]
DKL58_05470
Enzymes [BR:
lkl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DKL58_05470
Transfer RNA biogenesis [BR:
lkl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DKL58_05470
Prokaryotic type
DKL58_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AWM75454
LinkDB
All DBs
Position
complement(1159215..1160108)
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AA seq
297 aa
AA seq
DB search
MLNGILVIDKDKGMTSADVVYHLRKALHIKKIGHAGTLDPDVTGVLPIAIGQATKLIELM
HEENKKYVGQGIFGFATDSYDISGKKTEFKKITSKIKYHQIQKAMQEFVGSIEQVPPIYS
AVRVNGKHLYEYARAGIKVERPKRRVEVFSYDLTNEPVFDKENGQEVFDFKIECSKGTYV
RSLINDLGTNLGVPAVMKNLRRTSSSGFDIDQAVKLNEISENPDMVNELLQPIDSFFTNY
AHEDIDTDLWAKVKNGATISLKTNAKKVALGYNNRVKAIYQKDGTMYRPYLMLLQNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatggtattttagtgatagataaggataagggcatgacaagcgcagacgttgtc
tatcatttacgcaaagcgctgcatattaaaaaaataggccatgctggtaccctagatcct
gacgttacgggagtgctaccaattgcaattggtcaggccacaaaattgattgaattgatg
cacgaggaaaacaaaaaatatgtaggtcagggaatttttggctttgccactgatagttac
gatattagtggcaaaaaaacagaatttaaaaaaataactagtaaaattaaataccatcaa
attcaaaaagctatgcaagagtttgtgggcagtatagaacaggtaccacctatttattcg
gccgtccgagtaaatggcaagcatttatatgaatatgcgcgagcaggtattaaagttgaa
aggccaaaaagacgggttgaagttttttcttacgatcttacaaatgaacctgtttttgat
aaagaaaatggtcaagaagtttttgattttaaaattgaatgcagcaaaggaacctatgtt
cgctctttaataaatgatttgggaacaaaccttggtgtgccagcagtaatgaaaaatttg
cggcgcacttctagttcaggctttgatatagatcaagctgttaaattgaatgaaatttca
gaaaatccagatatggtaaatgaattgcttcaaccaattgactctttttttactaattat
gctcatgaggatattgatacagatctgtgggccaaagttaaaaatggagcaacgatttct
ctgaaaacgaatgcaaaaaaagtggcattaggatacaataatagagttaaggcaatttat
caaaaagatggtaccatgtatcgcccttatttaatgcttttacaaaatgaataa
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