Lactobacillus kullabergensis: DKL58_06460
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Entry
DKL58_06460 CDS
T06382
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lkl
Lactobacillus kullabergensis
Brite
KEGG Orthology (KO) [BR:
lkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkl03019
]
DKL58_06460
03009 Ribosome biogenesis [BR:
lkl03009
]
DKL58_06460
Enzymes [BR:
lkl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DKL58_06460
Messenger RNA biogenesis [BR:
lkl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DKL58_06460
Ribosome biogenesis [BR:
lkl03009
]
Prokaryotic type
rRNA helicases
DKL58_06460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AWM75633
LinkDB
All DBs
Position
complement(1365893..1367254)
Genome browser
AA seq
453 aa
AA seq
DB search
MNNIFENEQINPAIRQGLKKINFVKPTEVQEKVIPVLMARKNAVVQAVTGSGKTHAFLIP
VMNEIDENLQFPQAILTTPSRELAQQLYQVARQLRDASNLNLSIALLAGGTDRERQIESI
SRHKPQIIIATPGRLHDFVEKKILPLDYVKNFVIDEADMTLDMGFLSEIDFIAQRLPQNC
VLTAFSATIPVKLANFLRKYMAKPETIIIDNPTVISPTVKNDLLDIGSKNRKKILYQLLT
IGQPYLALIFANTKQTVDELADFLINQGLKVAKIHGGITERERKRTMREVEAGQYQYVVA
TDLAARGIDIEGVSLVINYEIPRELEFVIHRIGRTGRNGMSGHAITLIREEEMNQILKLE
KMGIHFDFVEIKDSSLVPRTHYHNRKLRQSTSQGLDNKVRGMVKKAQKKRKPGYKKKIKR
AIKQDRAQKNRIEQRSKIRKAKRQRKNRRDSQD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatttttgaaaatgaacagataaatccagcaattagacagggattaaaaaag
attaactttgttaaacccactgaagtgcaggaaaaagtgatccctgttttaatggcacgc
aaaaatgctgtagtgcaagcagttaccggttcaggtaaaactcacgcctttttgattcct
gttatgaatgaaattgacgagaatcttcaatttcctcaggcaatcttgactacgcctagt
cgtgaacttgcccagcaattgtatcaagtagcccgtcagttaagggatgcttccaatcta
aacctgtctattgcgttattagcaggtggtaccgatcgtgagcggcaaattgaaagtatt
agcagacataaaccgcaaattatcattgctactcccggtagactacatgattttgttgaa
aaaaagattttgccactagattatgtcaaaaactttgtcattgatgaggctgatatgact
ctggacatgggatttttaagtgaaatcgattttattgcacaaagattgccccaaaactgt
gttttgactgctttttcagccacaattccggttaagttggctaactttttacgtaaatac
atggcaaagcctgaaactattatcatagataatcctaccgttatctctccaacagtgaaa
aacgatttgcttgatattggctcaaaaaatcgcaaaaaaatactctatcaattattaaca
attggccagccgtatttagcactaatttttgctaacacaaagcaaactgttgatgaacta
gcagattttctcattaatcaaggcttaaaagtggccaaaattcatggtggaattactgag
cgcgaacgtaaaagaacaatgcgtgaagtagaagccggacaataccagtatgtagtggca
actgatttagctgcacgcggcattgatattgaaggtgtcagcttagttattaattatgaa
attccccgtgaattagaatttgtgattcatcgtattggtagaaccggccgaaatgggatg
agcggtcatgccatcacgttaattcgtgaagaagaaatgaatcaaattcttaagctggaa
aaaatgggaattcattttgattttgtcgaaattaaagatagttctctggtaccgcgaacg
cattatcataaccgcaaattaagacaatcaacttctcaaggccttgataataaggtaaga
gggatggtaaaaaaagcgcagaaaaaacgtaaacctggctataagaaaaagattaaaaga
gctattaagcaagatagagcgcaaaaaaatagaattgaacaacgcagtaaaattcgaaaa
gctaaacgacaaagaaaaaataggcgtgatagtcaagactaa
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