Lactobacillus kullabergensis: DKL58_06485
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Entry
DKL58_06485 CDS
T06382
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lkl
Lactobacillus kullabergensis
Pathway
lkl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DKL58_06485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkl03400
]
DKL58_06485
Enzymes [BR:
lkl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DKL58_06485
DNA repair and recombination proteins [BR:
lkl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DKL58_06485
RecFOR pathway proteins
DKL58_06485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
nSTAND3
Mg_chelatase
AAA_14
AAA_16
AAA_3
RNA_helicase
AAA_22
NB-ARC
TsaE
Bac_DnaA
AAA_24
Rad17
DUF815
AAA_18
NTPase_1
AAA_25
AAA_17
IstB_IS21
NPHP3_N
AAA_28
AAA_33
NACHT
Motif
Other DBs
NCBI-ProteinID:
AWM75638
UniProt:
A0A0F4L811
LinkDB
All DBs
Position
complement(1371514..1372527)
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AA seq
337 aa
AA seq
DB search
MAENKNEIVSGEVQGSEEEQAEFSLRPQTLDEYLGQKRVKKEMAVYIKAAKKRDEALDHV
LLYGPPGLGKTTLAFVIANELGVHLKSTSGPAIEKAGDLVALLTDLNPGDILFIDEIHRL
AKPIEEVLYSAMEDYYVDIVIGEGQTTHAVHVPLPPFTLVGATTLAGQLSAPLRGRFGIV
EHLQYYTVDELEKIICRSSKVFNIDIEPQAAHELARRSRGTPRVANRLLRRVRDFAQVKG
EEVISFATTKSSLQQLQVDDEGLNQTDRKILRVIIENYRGGPVGIRTLAANSGEDVETIQ
SLYEPYLMQNGFLLMTPRGRMVTEKAYVHLGLPLPNK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
ttggcagaaaataaaaatgagatagtttctggtgaagttcagggctcagaagaagaacaa
gccgaattttcactgcgtccccaaacactagatgaatatttgggacaaaaacgggtaaaa
aaagagatggcagtttatataaaggctgccaaaaaaagagacgaagcactggatcacgtt
ctattatatggtccgcctggattgggaaaaacaacgttagcatttgtaatagctaatgag
cttggtgtccacctaaaaagtaccagtggacctgcaattgaaaaggctggtgatttagtt
gccttgctaactgatcttaatcctggtgatattttatttattgatgaaattcaccgtttg
gccaagccaattgaagaagtactttattccgcaatggaagactattatgttgatatcgtg
attggtgaagggcagactactcacgcggttcatgtccccttgccacctttcactttagtt
ggcgcaactactttagccggtcaactttctgctcctttacgcggacgatttggtatcgtg
gaacacttgcagtactatactgttgatgaactggaaaaaattatttgtcgttcaagcaaa
gtttttaatattgatattgaacctcaagcagcacacgaattagcacgcagatctaggggc
acgccccgtgtggctaacaggttattacgaagagtgcgtgattttgctcaggtcaaagga
gaagaagttatttcttttgcgactaccaaaagctcattgcaacaattgcaagttgacgat
gaagggcttaatcagactgatcgcaaaattttgcgtgtgattattgaaaattatcgtggt
ggtccggtaggaatcaggactttagcggcaaattcaggagaagacgttgaaactatccag
tcactgtacgaaccatatttaatgcaaaatggctttttattaatgactccaagaggaaga
atggtcactgagaaagcttacgttcatttaggcctgcccttgccaaacaaataa
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