Lactobacillus kullabergensis: DKL58_06975
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Entry
DKL58_06975 CDS
T06382
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lkl
Lactobacillus kullabergensis
Pathway
lkl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lkl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DKL58_06975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkl03021
]
DKL58_06975
03400 DNA repair and recombination proteins [BR:
lkl03400
]
DKL58_06975
Enzymes [BR:
lkl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DKL58_06975
Transcription machinery [BR:
lkl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DKL58_06975
DNA repair and recombination proteins [BR:
lkl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DKL58_06975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
Motif
Other DBs
NCBI-ProteinID:
AWM75727
LinkDB
All DBs
Position
complement(1458523..1459461)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITVVDQEKSYGKFVIEPLERGFGTTLGNSLRRVLLTSIPGTGLVYVQIDDVL
HEFSTVPGVREDVAKIILNLKKLELKSFSDEQKIIEIDVEGPATVTADDLKADADIQILN
PDQYICTIADGGHLHMQIAVKNGRGYVAASDNKSEDMPIGVIPVDSLFSPIKKVNYQVES
TRVGKRDDFDRLTLEIWTDGSIKPNDALSFAAKILVAHFKVFETADANTKFNDVMVEKED
DTAEKKLEMTIEELDLSVRSYNCLKRAGINTLQELTDKTEADMMRVRNLGRKSLEEVKNK
LADLGLSLRQED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaatattaccgttgtggaccaagaaaagtcttatggtaaa
tttgttattgaaccacttgaacgaggctttggtactactttaggtaactcattacgtaga
gttttactgacatctatcccaggtacaggacttgtttacgttcaaatagatgatgtctta
cacgaattctcaaccgttccgggcgtaagagaagatgtcgctaagataatcctgaacctt
aagaaacttgaattaaagtctttttcagatgaacaaaagattattgaaattgacgtagag
ggtccggctactgtaaccgccgatgatcttaaagctgacgcagatattcaaattctgaat
cctgatcaatatatttgtactattgctgatggtggccacttgcatatgcaaattgctgtt
aaaaatggtcgcggctatgttgcagcaagtgacaacaagagcgaggatatgccaattggt
gttattcctgttgattccttattttctccaataaagaaggtcaattaccaggttgaatca
actcgtgttggtaaaagagacgattttgacaggctcactttagagatttggacagatggt
tcaatcaagcctaacgatgccctcagtttcgcagcaaaaatattagttgcacactttaaa
gtgtttgaaactgctgatgcaaatactaaattcaatgatgtaatggttgaaaaagaggac
gatacagctgaaaagaagcttgaaatgacaattgaagagcttgatctttctgttcgttca
tacaattgtcttaaacgtgccggtattaatacactgcaagaactaactgacaaaacagaa
gcagatatgatgcgtgtacgtaacttaggacgtaaatcgttggaagaagttaaaaataaa
ttagctgacttgggactatcattgcgtcaagaagattaa
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