Leptospira kmetyi: EFP84_07225
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Entry
EFP84_07225 CDS
T05705
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
lkm
Leptospira kmetyi
Pathway
lkm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFP84_07225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkm03019
]
EFP84_07225
Enzymes [BR:
lkm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EFP84_07225
Messenger RNA biogenesis [BR:
lkm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EFP84_07225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrD-helicase
CMS1
Motif
Other DBs
NCBI-ProteinID:
AYV55321
UniProt:
A0AAD0ULZ8
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All DBs
Position
1:complement(1566086..1567750)
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AA seq
554 aa
AA seq
DB search
MKFEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVV
HTILTKEIQGVSALVLAPTRELTMQISEEAKKLLKHSNGVRAVPIIGGTDYKSQNKDLEG
LNGIIVATPGRLIDMIKSGSIDISNVEFFVLDEADRMLDMGFIQDIRWLLHKCKNRKQTL
LFSATLSVEVMRLAYRFLNEPVEIQINPEKIITERIDQKIVHLGREEKIPYMTNLIVNSK
EEGQGIIFTNYKANIPKIVHTLRKYGIPVTGISSELDQKKRLRLLRDFKSGKYRYMVATD
VASRGIDVENIDIVYNYDLPQDTENYVHRIGRTARAGRKGKAIGFCSESDYVELEKIEKY
LKQKIDVLEVQEEYIQFPAGDFQAFVGGDSYDREKETHFKQNGRRPHDRGDRAPHKHDRD
RRGDKRHASHTQSHSPARDGHKKKPAAAIQEAEFFLQKADSVLSSEPKGNKQGNKNQHRF
QGNKDKQRQPQGSQQGAGNKNQQNRDRNGNRQQHANKNYDKSKRNLFDINDTQREDSKKK
KGSIWQKIKSIFGG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgaagaactatccatacatccaaagttactttcagccattcaagaaatcgga
tacaccgaactcacaccgatccaagaaaaatcgatcccgcacggattggaaggcaaggac
atcacaggtcttgcacaaaccggtacggggaagacggtcgcgtttttgataccggtcgtt
cacaccattcttaccaaagagatccaaggagtttccgcgttggtcctcgcgcccacgaga
gaacttacgatgcagatctccgaagaagccaaaaaacttctgaaacattccaacggagtg
cgggcggttccgatcatcggaggaacggattacaaatcccagaacaaggatctcgaaggt
ttaaacggaatcatcgtagcgactccgggaagattgatcgacatgatcaagtccggttcc
atcgacatatcgaacgtggagttcttcgtcctcgacgaagcggatcgtatgctcgacatg
ggattcatccaggacattcgttggcttcttcataaatgtaagaatcgcaagcagacctta
ttgttctccgctactttgtcggtggaagtgatgagactcgcgtatcgttttttaaacgaa
cccgtcgagattcagatcaatcccgaaaagatcatcaccgaaagaatcgaccaaaagatc
gttcacctcggacgcgaggaaaaaattccttacatgaccaacctcatcgtaaattcgaaa
gaggaaggccaaggaatcatattcacgaattataaagcgaatattccgaagatcgttcat
acgcttcgtaaatacggaattcccgtcaccggaatttcctccgagttggatcagaaaaaa
agactcagacttctccgcgattttaaatccggtaaataccgttatatggtcgcgaccgac
gtggcttcccgagggatcgacgtcgaaaacatagacatcgtttacaactacgatcttcct
caagacacggagaactacgttcatagaatcggtcgtaccgcaagagcgggaagaaaagga
aaagccatcggtttttgttccgagtcggattacgttgagttggaaaagatcgaaaaatat
ctgaaacaaaagatcgatgttttggaagttcaggaagaatacattcaatttcctgcaggt
gattttcaggcctttgtgggcggagattcctacgatcgtgaaaaggaaacccatttcaaa
cagaatggaagacgtcctcacgacagaggagatcgcgctcctcacaaacacgatcgggat
cgtagaggcgacaaacgtcacgcaagtcatacgcagtcgcattctcccgcgagagacggt
cataagaaaaaacccgcggccgcgattcaagaagcggaattctttttacaaaaggcggat
tccgttctttcctccgaaccgaaaggaaacaaacaaggaaataagaatcaacatcgcttt
caaggcaacaaggacaaacaacgtcagcctcaaggcagtcaacagggcgccggtaataaa
aatcagcagaaccgcgatcgcaacggaaacagacaacaacacgcgaacaagaattacgat
aagagcaaacggaatttgttcgatatcaacgatactcaaagagaagattctaaaaagaaa
aaaggttcgatttggcaaaaaatcaaatctatctttgggggctga
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